Gene annotation
Transcriptome id Sobic.001G027900.1
Synonym Sb01g002640, CHX19, ATCHX19
Functional annotation ATCHX, putative, expressed
UniProt C5WU30
Pfam PF00999
Panther DB PTHR32468 PTHR32468:SF20
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0015299solute:proton antiporter activity GO:0006812cation transport


Orthologs (automatic annotation)
TAIR AT3G17630 : cation/H+ exchanger 19
RAP-DB (Rice) LOC_Os03g61290.1 : ATCHX, putative, expressed
MaizeGDB (Corn) Zm00025a044040 , Zm00025a004711 , Zm00025a039786
Brachypodium KQJ85768 , KQJ85769 , KQK06510 , KQK12360 , KQK05704 , KQK07657
Barley HORVU1Hr1G005800.10 , HORVU1Hr1G005800.11 , HORVU5Hr1G008270.1 , HORVU5Hr1G008270.2 , HORVU5Hr1G008270.3 , HORVU5Hr1G008270.4 , HORVU5Hr1G008270.5 , HORVU5Hr1G008270.6 , HORVU5Hr1G008270.7 , HORVU6Hr1G076720.4 , HORVU6Hr1G076720.1 , HORVU6Hr1G076720.2 , HORVU6Hr1G076720.3 , HORVU1Hr1G005800.3 , HORVU5Hr1G115390.2 , HORVU5Hr1G115390.3 , HORVU5Hr1G115390.1 , HORVU6Hr1G040290.1 , HORVU6Hr1G040290.3 , HORVU6Hr1G040290.2 , HORVU6Hr1G040290.4 , HORVU3Hr1G080390.1 , HORVU3Hr1G080390.3 , HORVU3Hr1G080390.2
Wheat TraesCS5A02G031600 , TraesCS2B02G551300 , TraesCS1D02G239500 , TraesCS1D02G418100 , TraesCS2D02G523600 , TraesCS5D02G505000 , TraesCS2A02G521800 , TraesCS5A02G031700 , TraesCS3B02G372100 , TraesCS1B02G440400 , TraesCS1A02G037400 , TraesCS1A02G037400 , TraesCS1D02G039000 , TraesCS1D02G039000 , TraesCS5D02G039900 , TraesCS5B02G031800 , TraesCS4A02G368300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G204750 - -
2 Sobic.002G292000 - -
3 Sobic.004G298250 - -
4 Sobic.003G069300 transferase family protein, putative, expressed -
5 Sobic.004G129201 - -
6 Sobic.004G230000 expressed protein -
7 Sobic.004G230000 expressed protein -
8 Sobic.004G230000 expressed protein -
9 Sobic.004G230000 expressed protein -
10 Sobic.004G230000 expressed protein -
11 Sobic.004G230000 expressed protein -
12 Sobic.004G230000 expressed protein -
13 Sobic.004G230000 expressed protein -
14 Sobic.003G344501 - -
15 Sobic.006G061500 ulp1 protease family protein, putative, expressed -
16 Sobic.005G165201 - -
17 Sobic.002G125400 - -
18 Sobic.009G147500 potassium channel AKT2/3, putative, expressed -
19 Sobic.001G259850 - -
20 Sobic.005G081200 DEFL33 - Defensin and Defensin-like DEFL family, expressed -


Gene co-expression network
sample Sobic001G027900 Sobic001G027900 Sobic003G204750 Sobic003G204750 Sobic001G027900--Sobic003G204750 Sobic002G292000 Sobic002G292000 Sobic001G027900--Sobic002G292000 Sobic004G298250 Sobic004G298250 Sobic001G027900--Sobic004G298250 Sobic003G069300 Sobic003G069300 Sobic001G027900--Sobic003G069300 Sobic004G129201 Sobic004G129201 Sobic001G027900--Sobic004G129201 Sobic004G230000 Sobic004G230000 Sobic001G027900--Sobic004G230000 Sobic009G087480 Sobic009G087480 Sobic003G204750--Sobic009G087480 Sobic003G204750--Sobic001G027900 Sobic003G204750--Sobic002G292000 Sobic005G156450 Sobic005G156450 Sobic003G204750--Sobic005G156450 Sobic008G029000 Sobic008G029000 Sobic003G204750--Sobic008G029000 Sobic004G351000 Sobic004G351000 Sobic003G204750--Sobic004G351000 Sobic005G199151 Sobic005G199151 Sobic003G204750--Sobic005G199151 Sobic002G276500 Sobic002G276500 Sobic003G204750--Sobic002G276500 Sobic001G332933 Sobic001G332933 Sobic003G204750--Sobic001G332933 Sobic009G147450 Sobic009G147450 Sobic002G292000--Sobic009G147450 Sobic003G081200 Sobic003G081200 Sobic002G292000--Sobic003G081200 Sobic005G065050 Sobic005G065050 Sobic002G292000--Sobic005G065050 Sobic004G024350 Sobic004G024350 Sobic002G292000--Sobic004G024350 Sobic001G343700 Sobic001G343700 Sobic002G292000--Sobic001G343700 Sobic001G505066 Sobic001G505066 Sobic002G292000--Sobic001G505066 Sobic001G423666 Sobic001G423666 Sobic002G292000--Sobic001G423666 Sobic010G018200 Sobic010G018200 Sobic002G292000--Sobic010G018200 Sobic002G292000--Sobic004G230000 Sobic004G120400 Sobic004G120400 Sobic004G298250--Sobic004G120400 Sobic004G298250--Sobic002G292000 Sobic004G298250--Sobic001G027900 Sobic004G298250--Sobic003G204750 Sobic004G298250--Sobic001G343700 Sobic001G060800 Sobic001G060800 Sobic004G298250--Sobic001G060800 Sobic001G526050 Sobic001G526050 Sobic004G298250--Sobic001G526050 Sobic004G298250--Sobic003G081200 Sobic003G047400 Sobic003G047400 Sobic004G298250--Sobic003G047400 Sobic003G069300--Sobic004G129201 Sobic003G069300--Sobic004G230000 Sobic004G129201--Sobic003G069300 Sobic004G129201--Sobic004G230000 Sobic004G230000--Sobic004G230000 Sobic003G344501 Sobic003G344501 Sobic004G230000--Sobic003G344501 Sobic006G061500 Sobic006G061500 Sobic004G230000--Sobic006G061500
Octagon: transcription factors


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