Gene annotation
| Transcriptome id | Sobic.001G183200.1 |
|---|---|
| Synonym | Sb01g015930, MBD13 |
| Functional annotation | methyl-CpG binding domain containing protein, expressed |
| UniProt | A0A1B6QJN0 |
| Pfam | PF01429 |
| Panther DB | PTHR34067 PTHR34067:SF1 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | GO:0005634; nucleus GO:0003677DNA binding |
Orthologs (automatic annotation)
| TAIR | AT5G52230 : methyl-CPG-binding domain protein 13 |
|---|---|
| RAP-DB (Rice) | LOC_Os04g20560.2 : methyl-CpG binding domain containing protein, expressed |
| MaizeGDB (Corn) | Zm00025a007094 |
| Brachypodium | - |
| Barley | - |
| Wheat | - |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G200800 | LTPL160 - Protease inhibitor/seed storage/LTP family protein precursor, expressed | - |
| 2 | Sobic.002G103000 | PME/invertase inhibitor, putative, expressed | - |
| 3 | Sobic.001G209701 | - | - |
| 4 | Sobic.001G209701 | - | - |
| 5 | Sobic.001G209701 | - | - |
| 6 | Sobic.001G209701 | - | - |
| 7 | Sobic.001G209701 | - | - |
| 8 | Sobic.001G209701 | - | - |
| 9 | Sobic.001G209701 | - | - |
| 10 | Sobic.001G209701 | - | - |
| 11 | Sobic.001G209701 | - | - |
| 12 | Sobic.001G209701 | - | - |
| 13 | Sobic.001G209701 | - | - |
| 14 | Sobic.001G209701 | - | - |
| 15 | Sobic.001G209701 | - | - |
| 16 | Sobic.001G209701 | - | - |
| 17 | Sobic.001G209701 | - | - |
| 18 | Sobic.001G209701 | - | - |
| 19 | Sobic.001G209701 | - | - |
| 20 | Sobic.001G209701 | - | - |
Gene co-expression network
Octagon: transcription factors
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