Gene annotation
Transcriptome id Sobic.001G227100.1
Synonym Sb01g019910
Functional annotation zinc finger family protein, putative, expressed
UniProt C5WZE3
Pfam PF17123 PF00092 PF14624
Panther DB PTHR10579 PTHR10579:SF53
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G60710 : Zinc finger (C3HC4-type RING finger) family protein
RAP-DB (Rice) LOC_Os03g04890.1 : zinc finger family protein, putative, expressed
MaizeGDB (Corn) Zm00025a017682 , Zm00025a006668 , Zm00025a000571
Brachypodium -
Barley HORVU4Hr1G084370.1 , HORVU4Hr1G084330.1
Wheat TraesCS2D02G043700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G241000 expressed protein -
2 Sobic.003G342000 bet v I allergen family protein, putative, expressed K14496: abscisic acid receptor PYR/PYL family
3 Sobic.005G085700 heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed K10532: heparan-alpha-glucosaminide N-acetyltransferase
4 Sobic.009G010000 expressed protein -
5 Sobic.003G392500 cytochrome P450, putative, expressed -
6 Sobic.009G071900 LTPL31 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
7 Sobic.007G001600 LTPL151 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
8 Sobic.005G199300 expressed protein -
9 Sobic.002G370300 pectinesterase, putative, expressed K01051: pectinesterase
10 Sobic.003G226000 polygalacturonase, putative, expressed K01184: polygalacturonase
11 Sobic.002G274900 harpin-induced protein 1 domain containing protein, expressed -
12 Sobic.002G016250 - -
13 Sobic.010G142300 - -
14 Sobic.006G034275 - -
15 Sobic.002G362400 uncharacterized 50.6 kDa protein in the 5region of gyrA and gyrB, putative, expressed -
16 Sobic.005G110000 LTPL151 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.003G101100 no apical meristem protein, putative, expressed -
18 Sobic.005G140300 expressed protein -
19 Sobic.009G010150 - -
20 Sobic.006G031600 expressed protein -


Gene co-expression network
sample Sobic001G227100 Sobic001G227100 Sobic002G241000 Sobic002G241000 Sobic001G227100--Sobic002G241000 Sobic003G342000 Sobic003G342000 Sobic001G227100--Sobic003G342000 Sobic005G085700 Sobic005G085700 Sobic001G227100--Sobic005G085700 Sobic009G010000 Sobic009G010000 Sobic001G227100--Sobic009G010000 Sobic003G392500 Sobic003G392500 Sobic001G227100--Sobic003G392500 Sobic009G071900 Sobic009G071900 Sobic001G227100--Sobic009G071900 Sobic007G001600 Sobic007G001600 Sobic001G227100--Sobic007G001600 Sobic005G199300 Sobic005G199300 Sobic001G227100--Sobic005G199300 Sobic002G370300 Sobic002G370300 Sobic001G227100--Sobic002G370300 Sobic002G241000--Sobic001G227100 Sobic004G063750 Sobic004G063750 Sobic002G241000--Sobic004G063750 Sobic006G082700 Sobic006G082700 Sobic002G241000--Sobic006G082700 Sobic007G135900 Sobic007G135900 Sobic002G241000--Sobic007G135900 Sobic002G059600 Sobic002G059600 Sobic002G241000--Sobic002G059600 Sobic003G438200 Sobic003G438200 Sobic002G241000--Sobic003G438200 Sobic001G298100 Sobic001G298100 Sobic002G241000--Sobic001G298100 Sobic002G295000 Sobic002G295000 Sobic002G241000--Sobic002G295000 Sobic010G212000 Sobic010G212000 Sobic002G241000--Sobic010G212000 Sobic002G016250 Sobic002G016250 Sobic003G342000--Sobic002G016250 Sobic003G389400 Sobic003G389400 Sobic003G342000--Sobic003G389400 Sobic009G231500 Sobic009G231500 Sobic003G342000--Sobic009G231500 Sobic008G064250 Sobic008G064250 Sobic003G342000--Sobic008G064250 Sobic002G274900 Sobic002G274900 Sobic003G342000--Sobic002G274900 Sobic001G203100 Sobic001G203100 Sobic003G342000--Sobic001G203100 Sobic007G036600 Sobic007G036600 Sobic003G342000--Sobic007G036600 Sobic003G226000 Sobic003G226000 Sobic003G342000--Sobic003G226000 Sobic006G154300 Sobic006G154300 Sobic003G342000--Sobic006G154300 Sobic005G085700--Sobic009G010000 Sobic005G085700--Sobic003G392500 Sobic005G085700--Sobic005G199300 Sobic005G085700--Sobic007G001600 Sobic005G085700--Sobic003G226000 Sobic002G362400 Sobic002G362400 Sobic005G085700--Sobic002G362400 Sobic005G085700--Sobic002G370300 Sobic005G085700--Sobic002G274900 Sobic005G110000 Sobic005G110000 Sobic005G085700--Sobic005G110000 Sobic009G010000--Sobic003G392500 Sobic009G010000--Sobic007G001600 Sobic009G010000--Sobic005G199300 Sobic009G009900 Sobic009G009900 Sobic009G010000--Sobic009G009900 Sobic009G010000--Sobic003G226000 Sobic009G010000--Sobic002G274900 Sobic009G010000--Sobic002G370300 Sobic009G010150 Sobic009G010150 Sobic009G010000--Sobic009G010150 Sobic009G010000--Sobic006G154300 Sobic003G392500--Sobic009G010000 Sobic003G392500--Sobic009G009900 Sobic003G392500--Sobic007G001600 Sobic003G392500--Sobic005G199300 Sobic006G031600 Sobic006G031600 Sobic003G392500--Sobic006G031600 Sobic010G142300 Sobic010G142300 Sobic003G392500--Sobic010G142300 Sobic003G392500--Sobic003G226000 Sobic003G392500--Sobic002G370300 Sobic004G313800 Sobic004G313800 Sobic003G392500--Sobic004G313800 Sobic009G073700 Sobic009G073700 Sobic009G071900--Sobic009G073700 Sobic009G071900--Sobic005G110000 Sobic008G120450 Sobic008G120450 Sobic009G071900--Sobic008G120450 Sobic009G071900--Sobic002G362400 Sobic005G140300 Sobic005G140300 Sobic009G071900--Sobic005G140300 Sobic007G029800 Sobic007G029800 Sobic009G071900--Sobic007G029800 Sobic005G185600 Sobic005G185600 Sobic009G071900--Sobic005G185600 Sobic005G193100 Sobic005G193100 Sobic009G071900--Sobic005G193100 Sobic005G192801 Sobic005G192801 Sobic009G071900--Sobic005G192801 Sobic007G001600--Sobic005G199300 Sobic007G001600--Sobic003G226000 Sobic007G001600--Sobic002G274900 Sobic007G001600--Sobic009G010000 Sobic007G001600--Sobic009G010150 Sobic007G001600--Sobic006G154300 Sobic007G001600--Sobic002G370300 Sobic007G001600--Sobic003G392500 Sobic007G001600--Sobic002G362400 Sobic005G199300--Sobic007G001600 Sobic005G199300--Sobic003G226000 Sobic005G199300--Sobic002G274900 Sobic005G199300--Sobic009G010000 Sobic005G199300--Sobic002G370300 Sobic005G199300--Sobic009G010150 Sobic005G199300--Sobic002G362400 Sobic005G199300--Sobic006G154300 Sobic005G199300--Sobic003G392500 Sobic002G370300--Sobic003G226000 Sobic002G370300--Sobic005G199300 Sobic003G101100 Sobic003G101100 Sobic002G370300--Sobic003G101100 Sobic002G370300--Sobic007G001600 Sobic002G370300--Sobic002G274900 Sobic002G370300--Sobic002G362400 Sobic002G370300--Sobic009G010000 Sobic002G370300--Sobic003G392500 Sobic002G370300--Sobic009G010150
Octagon: transcription factors


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