Gene annotation
Transcriptome id Sobic.001G334501.1
Synonym -
Functional annotation -
UniProt A0A1Z5S8Y7
Pfam PF03405
Panther DB PTHR31155 PTHR31155:SF14
NCBI CDD -
KEGG Orthology K03921; FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
Gene Ontology GO:0006631; fatty acid metabolic process


Orthologs (automatic annotation)
TAIR AT3G02610 : Plant stearoyl-acyl-carrier-protein desaturase family protein
RAP-DB (Rice) LOC_Os03g30950.1 : acyl-desaturase, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a047587 , Zm00025a003595 , Zm00025a039503 , Zm00025a031382
Brachypodium KQK23305 , KQJ95532 , PNT74955 , PNT74954 , KQJ90512 , KQK10887
Barley HORVU3Hr1G092740.4 , HORVU3Hr1G092740.1 , HORVU3Hr1G092740.3 , HORVU3Hr1G092740.2 , HORVU3Hr1G061520.3 , HORVU2Hr1G006990.1 , HORVU3Hr1G061520.1 , HORVU3Hr1G061520.7 , HORVU3Hr1G061520.6 , HORVU3Hr1G061520.5 , HORVU3Hr1G061520.4 , HORVU5Hr1G068310.1 , HORVU5Hr1G068310.2 , HORVU3Hr1G061520.2 , HORVU3Hr1G091320.2 , HORVU3Hr1G091320.3 , HORVU3Hr1G091320.1
Wheat TraesCS3B02G453200 , TraesCS3B02G453200 , TraesCS5A02G237800 , TraesCS2D02G074000 , TraesCS5B02G235800 , TraesCS3A02G408700 , TraesCS3D02G413500 , TraesCS5A02G236800 , TraesCS5A02G237000 , TraesCS3A02G418000 , TraesCS5D02G244700 , TraesCS5B02G235900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G399600 LTPL2 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.002G270400 LTPL45 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
3 Sobic.007G037400 expressed protein -
4 Sobic.007G107500 LTPL4 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.010G187400 ABC-2 type transporter domain containing protein, expressed -
6 Sobic.006G006900 expressed protein -
7 Sobic.005G226500 thaumatin family domain containing protein, expressed -
8 Sobic.007G098600 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
10 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
11 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
12 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
13 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
14 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
15 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
16 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
17 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
18 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
19 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
20 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic001G334501 Sobic001G334501 Sobic002G399600 Sobic002G399600 Sobic001G334501--Sobic002G399600 Sobic002G270400 Sobic002G270400 Sobic001G334501--Sobic002G270400 Sobic007G037400 Sobic007G037400 Sobic001G334501--Sobic007G037400 Sobic007G107500 Sobic007G107500 Sobic001G334501--Sobic007G107500 Sobic010G187400 Sobic010G187400 Sobic001G334501--Sobic010G187400 Sobic006G006900 Sobic006G006900 Sobic001G334501--Sobic006G006900 Sobic005G226500 Sobic005G226500 Sobic001G334501--Sobic005G226500 Sobic007G098600 Sobic007G098600 Sobic001G334501--Sobic007G098600 Sobic001G133200 Sobic001G133200 Sobic001G334501--Sobic001G133200 Sobic002G399600--Sobic002G270400 Sobic002G399600--Sobic007G107500 Sobic002G399600--Sobic007G037400 Sobic002G399600--Sobic005G226500 Sobic002G399600--Sobic006G006900 Sobic002G399600--Sobic010G187400 Sobic002G399600--Sobic007G098600 Sobic002G399600--Sobic001G133200 Sobic002G270400--Sobic007G037400 Sobic002G270400--Sobic007G107500 Sobic002G270400--Sobic006G006900 Sobic002G270400--Sobic007G098600 Sobic002G270400--Sobic001G133200 Sobic007G037400--Sobic007G107500 Sobic007G037400--Sobic006G006900 Sobic007G037400--Sobic007G098600 Sobic007G037400--Sobic001G133200 Sobic007G107500--Sobic007G037400 Sobic007G107500--Sobic006G006900 Sobic007G107500--Sobic007G098600 Sobic003G263800 Sobic003G263800 Sobic007G107500--Sobic003G263800 Sobic002G427550 Sobic002G427550 Sobic007G107500--Sobic002G427550 Sobic007G107500--Sobic001G133200 Sobic010G187400--Sobic006G006900 Sobic010G187400--Sobic007G037400 Sobic010G187400--Sobic007G107500 Sobic010G187400--Sobic007G098600 Sobic010G187400--Sobic002G270400 Sobic008G032400 Sobic008G032400 Sobic010G187400--Sobic008G032400 Sobic010G187400--Sobic001G133200 Sobic006G006900--Sobic007G098600 Sobic006G006900--Sobic001G133200 Sobic005G226500--Sobic007G107500 Sobic005G226500--Sobic007G037400 Sobic005G226500--Sobic006G006900 Sobic005G226500--Sobic002G270400 Sobic005G226500--Sobic002G399600 Sobic005G226500--Sobic007G098600 Sobic005G226500--Sobic001G133200 Sobic007G098600--Sobic001G133200 Sobic001G133200--Sobic001G133200
Octagon: transcription factors


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