Gene annotation
| Transcriptome id | Sobic.001G373300.1 |
|---|---|
| Synonym | Sb01g035460, ATTPS21, TPS21 |
| Functional annotation | terpene synthase, putative, expressed |
| UniProt | A0A1B6QN87 |
| Pfam | PF01397 PF03936 |
| Panther DB | PTHR31225 PTHR31225:SF2 |
| NCBI CDD | - |
| KEGG Orthology | K15803; (-)-germacrene D synthase |
| Gene Ontology | GO:0016829; lyase activity GO:0010333terpene synthase activity GO:0008152metabolic process GO:0000287magnesium ion binding |
Orthologs (automatic annotation)
| TAIR | AT5G23960 : terpene synthase 21 |
|---|---|
| RAP-DB (Rice) | LOC_Os07g11790.1 : terpene synthase, putative, expressed |
| MaizeGDB (Corn) | Zm00025a002446 |
| Brachypodium | KQK21701 , PNT77416 |
| Barley | HORVU2Hr1G023900.1 |
| Wheat | TraesCS2A02G135900 , TraesCS2B02G159800 , TraesCS2A02G136000 , TraesCS2D02G138400 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.007G064600 | cytochrome P450, putative, expressed | - |
| 2 | Sobic.010G200000 | triacylglycerol lipase precursor, putative, expressed | K01052: lysosomal acid lipase/cholesteryl ester hydrolase |
| 3 | Sobic.001G332050 | - | - |
| 4 | Sobic.001G332050 | - | - |
| 5 | Sobic.001G332050 | - | - |
| 6 | Sobic.001G332050 | - | - |
| 7 | Sobic.001G332050 | - | - |
| 8 | Sobic.001G332050 | - | - |
| 9 | Sobic.001G332050 | - | - |
| 10 | Sobic.001G332050 | - | - |
| 11 | Sobic.001G332050 | - | - |
| 12 | Sobic.001G332050 | - | - |
| 13 | Sobic.001G332050 | - | - |
| 14 | Sobic.001G332050 | - | - |
| 15 | Sobic.001G332050 | - | - |
| 16 | Sobic.001G332050 | - | - |
| 17 | Sobic.001G332050 | - | - |
| 18 | Sobic.001G332050 | - | - |
| 19 | Sobic.001G332050 | - | - |
| 20 | Sobic.003G206000 | THION27 - Plant thionin family protein precursor, expressed | - |
Gene co-expression network
Octagon: transcription factors
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