Gene annotation
| Transcriptome id | Sobic.001G543000.1 |
|---|---|
| Synonym | CHIA, ATCHIA, Sb01g050530 |
| Functional annotation | glycosyl hydrolase, putative, expressed |
| UniProt | C5WNN3 |
| Pfam | PF00704 |
| Panther DB | PTHR11177 PTHR11177:SF191 |
| NCBI CDD | - |
| KEGG Orthology | K01183; chitinase |
| Gene Ontology | GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds |
Orthologs (automatic annotation)
| TAIR | AT5G24090 : chitinase A |
|---|---|
| RAP-DB (Rice) | LOC_Os01g19750.1 : glycosyl hydrolase, putative, expressed |
| MaizeGDB (Corn) | Zm00025a045635 , Zm00025a026759 |
| Brachypodium | KQK09284 , KQK10702 , PNT72403 |
| Barley | HORVU3Hr1G087870.1 , HORVU3Hr1G054970.1 , HORVU3Hr1G084220.1 , HORVU3Hr1G084250.1 , HORVU3Hr1G084220.3 , HORVU3Hr1G084220.2 |
| Wheat | TraesCS3B02G408600 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.008G192200 | - | - |
| 2 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 3 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 4 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 5 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 6 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 7 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 8 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 9 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 10 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 11 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 12 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 13 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 14 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 15 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 16 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 17 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 18 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 19 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 20 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
Gene co-expression network
Octagon: transcription factors
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