Gene annotation
Transcriptome id Sobic.002G027401.1
Synonym -
Functional annotation -
UniProt A0A1B6Q8V3
Pfam PF00319
Panther DB PTHR11945 PTHR11945:SF207
NCBI CDD KOG0014; MADS box transcription factor
KEGG Orthology -
Gene Ontology GO:0003677; DNA binding


Orthologs (automatic annotation)
TAIR AT1G29962 : AGAMOUS-like 64
RAP-DB (Rice) LOC_Os01g11510.1 : OsMADS91 - MADS-box family gene with M-beta type-box, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G230000 expressed protein -
2 Sobic.004G230000 expressed protein -
3 Sobic.004G230000 expressed protein -
4 Sobic.004G230000 expressed protein -
5 Sobic.004G230000 expressed protein -
6 Sobic.004G230000 expressed protein -
7 Sobic.004G230000 expressed protein -
8 Sobic.004G230000 expressed protein -
9 Sobic.003G344501 - -
10 Sobic.006G061500 ulp1 protease family protein, putative, expressed -
11 Sobic.002G125400 - -
12 Sobic.003G069300 transferase family protein, putative, expressed -
13 Sobic.002G028300 MBTB48 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
14 Sobic.005G081200 DEFL33 - Defensin and Defensin-like DEFL family, expressed -
15 Sobic.004G024350 - -
16 Sobic.004G129201 - -
17 Sobic.010G033900 - -
18 Sobic.005G165201 - -
19 Sobic.003G003300 expressed protein -
20 Sobic.009G147450 - -


Gene co-expression network
sample Sobic002G027401 Sobic002G027401 Sobic004G230000 Sobic004G230000 Sobic002G027401--Sobic004G230000 Sobic003G344501 Sobic003G344501 Sobic002G027401--Sobic003G344501 Sobic004G230000--Sobic004G230000 Sobic004G230000--Sobic003G344501 Sobic006G061500 Sobic006G061500 Sobic004G230000--Sobic006G061500 Sobic003G344501--Sobic004G230000 Sobic003G344501--Sobic006G061500
Octagon: transcription factors


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