Gene annotation
Transcriptome id Sobic.002G114200.1
Synonym BPC2, Sb02g009770, BBR/BPC2, ATBPC2
Functional annotation GAGA-binding protein, putative, expressed
UniProt A0A1B6QAK9
Pfam PF06217
Panther DB PTHR31421 PTHR31421:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G14685 : basic pentacysteine 2
RAP-DB (Rice) LOC_Os10g02584.2 : GAGA-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a013327 , Zm00025a030380 , Zm00025a005221
Brachypodium -
Barley HORVU4Hr1G064660.4 , HORVU4Hr1G064660.5 , HORVU4Hr1G064660.6 , HORVU4Hr1G064660.7 , HORVU4Hr1G064660.1 , HORVU4Hr1G064660.2 , HORVU4Hr1G064660.3
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G019400 - -
2 Sobic.002G191450 - -
3 Sobic.001G064400 expressed protein -
4 Sobic.010G143666 - -
5 Sobic.003G229900 - -
6 Sobic.006G049633 - -
7 Sobic.002G202050 - -
8 Sobic.002G202050 - -
9 Sobic.002G202050 - -
10 Sobic.002G202050 - -
11 Sobic.006G247200 AMP-binding enzyme, putative, expressed -
12 Sobic.002G382200 - -
13 Sobic.002G069300 DNA binding protein, putative, expressed -
14 Sobic.003G281000 - -
15 Sobic.002G344800 - -
16 Sobic.009G043800 SbDFR4 expression was not detectable in the seedlings of either sorghum cultivar under our experimental conditions.(PubMedID : 20529887)@dihydroflavonol-4-reductase, putative, expressed K13082: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase
17 Sobic.002G014100 OsFBX212 - F-box domain containing protein, expressed -
18 Sobic.006G037500 triacylglycerol lipase 1 precursor, putative, expressed K01052: lysosomal acid lipase/cholesteryl ester hydrolase
19 Sobic.005G133750 - -
20 Sobic.004G178550 - -


Gene co-expression network
sample Sobic002G114200 Sobic002G114200 Sobic009G019400 Sobic009G019400 Sobic002G114200--Sobic009G019400 Sobic002G191450 Sobic002G191450 Sobic002G114200--Sobic002G191450 Sobic001G064400 Sobic001G064400 Sobic002G114200--Sobic001G064400 Sobic010G143666 Sobic010G143666 Sobic002G114200--Sobic010G143666 Sobic003G229900 Sobic003G229900 Sobic002G114200--Sobic003G229900 Sobic006G049633 Sobic006G049633 Sobic002G114200--Sobic006G049633 Sobic002G202050 Sobic002G202050 Sobic002G114200--Sobic002G202050 Sobic009G019400--Sobic002G114200 Sobic009G019400--Sobic010G143666 Sobic003G281000 Sobic003G281000 Sobic009G019400--Sobic003G281000 Sobic002G069300 Sobic002G069300 Sobic009G019400--Sobic002G069300 Sobic009G019400--Sobic006G049633 Sobic009G019400--Sobic003G229900 Sobic008G069100 Sobic008G069100 Sobic009G019400--Sobic008G069100 Sobic009G019400--Sobic002G202050 Sobic002G191450--Sobic001G064400 Sobic009G043800 Sobic009G043800 Sobic002G191450--Sobic009G043800 Sobic002G191450--Sobic002G114200 Sobic006G037500 Sobic006G037500 Sobic002G191450--Sobic006G037500 Sobic004G221800 Sobic004G221800 Sobic002G191450--Sobic004G221800 Sobic002G191450--Sobic009G019400 Sobic002G191450--Sobic003G229900 Sobic007G007100 Sobic007G007100 Sobic002G191450--Sobic007G007100 Sobic002G191450--Sobic006G049633 Sobic001G064400--Sobic002G191450 Sobic001G064400--Sobic009G043800 Sobic001G064400--Sobic002G114200 Sobic001G064400--Sobic006G037500 Sobic001G064400--Sobic004G221800 Sobic001G064400--Sobic009G019400 Sobic001G064400--Sobic003G229900 Sobic001G064400--Sobic007G007100 Sobic001G064400--Sobic006G049633 Sobic010G143666--Sobic002G202050 Sobic002G014100 Sobic002G014100 Sobic010G143666--Sobic002G014100 Sobic006G247200 Sobic006G247200 Sobic010G143666--Sobic006G247200 Sobic010G143666--Sobic002G069300 Sobic010G143666--Sobic003G281000 Sobic002G344800 Sobic002G344800 Sobic010G143666--Sobic002G344800 Sobic003G229900--Sobic006G049633 Sobic002G055000 Sobic002G055000 Sobic003G229900--Sobic002G055000 Sobic010G011500 Sobic010G011500 Sobic003G229900--Sobic010G011500 Sobic001G480900 Sobic001G480900 Sobic003G229900--Sobic001G480900 Sobic002G266700 Sobic002G266700 Sobic003G229900--Sobic002G266700 Sobic004G296750 Sobic004G296750 Sobic003G229900--Sobic004G296750 Sobic008G061900 Sobic008G061900 Sobic003G229900--Sobic008G061900 Sobic003G229900--Sobic007G007100 Sobic003G229900--Sobic009G019400 Sobic006G049633--Sobic003G229900 Sobic006G049633--Sobic002G055000 Sobic006G049633--Sobic004G296750 Sobic006G049633--Sobic001G480900 Sobic006G049633--Sobic002G266700 Sobic006G049633--Sobic010G011500 Sobic006G049633--Sobic008G061900 Sobic006G049633--Sobic003G281000 Sobic006G049633--Sobic007G007100 Sobic002G202050--Sobic002G202050 Sobic002G202050--Sobic006G247200 Sobic002G202050--Sobic002G344800 Sobic002G202050--Sobic002G014100 Sobic002G202050--Sobic010G143666 Sobic002G382200 Sobic002G382200 Sobic002G202050--Sobic002G382200 Sobic005G133750 Sobic005G133750 Sobic002G202050--Sobic005G133750
Octagon: transcription factors


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