Gene annotation
| Transcriptome id | Sobic.002G115700.1 |
|---|---|
| Synonym | LAP5, Sb02g009850, |
| Functional annotation | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543) Chalcone and stilbene synthase (At) (PubMedID : 27208977) chalcone and stilbene synthases, putative, expressed |
| UniProt | C5X4D3 |
| Pfam | PF00195 |
| Panther DB | PTHR11877 PTHR11877:SF25 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT4G34850 : Chalcone and stilbene synthase family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os07g22850.1 : chalcone and stilbene synthases, putative, expressed |
| MaizeGDB (Corn) | Zm00025a045724 |
| Brachypodium | KQK20123 |
| Barley | HORVU5Hr1G000690.4 , HORVU5Hr1G000690.2 , HORVU5Hr1G000690.3 |
| Wheat | TraesCS5D02G003600 , TraesCS5B02G003100 , TraesCS5A02G002900 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G438400 | POEI16 - Pollen Ole e I allergen and extensin family protein precursor, expressed | - |
| 2 | Sobic.006G006900 | expressed protein | - |
| 3 | Sobic.002G427550 | - | - |
| 4 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 5 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 6 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 7 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 8 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 9 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 10 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 11 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 12 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 13 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 14 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 15 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 16 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 17 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 18 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 19 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 20 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
Gene co-expression network
Octagon: transcription factors
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