Gene annotation
Transcriptome id Sobic.002G143700.1
Synonym ALPHA-SNAP2, Sb02g013590, ASNAP
Functional annotation alpha-soluble NSF attachment protein, putative, expressed
UniProt C5X7C1
Pfam PF14938
Panther DB PTHR13768
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006886; intracellular protein transport


Orthologs (automatic annotation)
TAIR AT3G56190 : alpha-soluble NSF attachment protein 2
RAP-DB (Rice) LOC_Os08g18110.1 : alpha-soluble NSF attachment protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.002G143700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G034275 - -
2 Sobic.010G142300 - -
3 Sobic.005G140300 expressed protein -
4 Sobic.005G223200 - -
5 Sobic.003G392500 cytochrome P450, putative, expressed -
6 Sobic.009G010000 expressed protein -
7 Sobic.005G199300 expressed protein -
8 Sobic.007G001600 LTPL151 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
9 Sobic.002G370300 pectinesterase, putative, expressed K01051: pectinesterase
10 Sobic.002G344900 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
11 Sobic.009G009900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@inhibitor I family protein, putative, expressed -
12 Sobic.006G031600 expressed protein -
13 Sobic.002G274900 harpin-induced protein 1 domain containing protein, expressed -
14 Sobic.003G226000 polygalacturonase, putative, expressed K01184: polygalacturonase
15 Sobic.006G154300 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@KUN1 - Kunitz-type trypsin inhibitor precursor, expressed -
16 Sobic.009G010150 - -
17 Sobic.004G313800 - -
18 Sobic.003G101100 no apical meristem protein, putative, expressed -
19 Sobic.007G156300 similar to Abscisic acid 8'-hydroxylase 2(PubMedID : 29862293)@cytochrome P450, putative, expressed -
20 Sobic.001G394100 - -


Gene co-expression network
sample Sobic002G143700 Sobic002G143700 Sobic006G034275 Sobic006G034275 Sobic002G143700--Sobic006G034275 Sobic010G142300 Sobic010G142300 Sobic002G143700--Sobic010G142300 Sobic005G140300 Sobic005G140300 Sobic002G143700--Sobic005G140300 Sobic005G223200 Sobic005G223200 Sobic002G143700--Sobic005G223200 Sobic003G392500 Sobic003G392500 Sobic002G143700--Sobic003G392500 Sobic009G010000 Sobic009G010000 Sobic002G143700--Sobic009G010000 Sobic005G199300 Sobic005G199300 Sobic002G143700--Sobic005G199300 Sobic007G001600 Sobic007G001600 Sobic002G143700--Sobic007G001600 Sobic002G370300 Sobic002G370300 Sobic002G143700--Sobic002G370300 Sobic006G034275--Sobic005G140300 Sobic006G034275--Sobic010G142300 Sobic006G034275--Sobic005G223200 Sobic006G034275--Sobic009G010000 Sobic006G034275--Sobic003G392500 Sobic006G034275--Sobic005G199300 Sobic006G034275--Sobic007G001600 Sobic009G009900 Sobic009G009900 Sobic006G034275--Sobic009G009900 Sobic002G274900 Sobic002G274900 Sobic006G034275--Sobic002G274900 Sobic010G142300--Sobic006G034275 Sobic010G142300--Sobic005G223200 Sobic010G142300--Sobic003G392500 Sobic010G142300--Sobic005G140300 Sobic010G142300--Sobic009G010000 Sobic006G031600 Sobic006G031600 Sobic010G142300--Sobic006G031600 Sobic010G142300--Sobic009G009900 Sobic010G142300--Sobic005G199300 Sobic010G142300--Sobic007G001600 Sobic005G140300--Sobic006G034275 Sobic005G140300--Sobic010G142300 Sobic005G140300--Sobic005G199300 Sobic005G140300--Sobic005G223200 Sobic005G140300--Sobic009G010000 Sobic005G140300--Sobic007G001600 Sobic005G110000 Sobic005G110000 Sobic005G140300--Sobic005G110000 Sobic005G140300--Sobic003G392500 Sobic005G140300--Sobic002G274900 Sobic005G223200--Sobic010G142300 Sobic004G313800 Sobic004G313800 Sobic005G223200--Sobic004G313800 Sobic005G223200--Sobic006G031600 Sobic005G223200--Sobic006G034275 Sobic007G156300 Sobic007G156300 Sobic005G223200--Sobic007G156300 Sobic005G223200--Sobic003G392500 Sobic005G223200--Sobic009G009900 Sobic005G223200--Sobic009G010000 Sobic006G154300 Sobic006G154300 Sobic005G223200--Sobic006G154300 Sobic003G392500--Sobic009G010000 Sobic003G392500--Sobic009G009900 Sobic003G392500--Sobic007G001600 Sobic003G392500--Sobic005G199300 Sobic003G392500--Sobic006G031600 Sobic003G392500--Sobic010G142300 Sobic003G226000 Sobic003G226000 Sobic003G392500--Sobic003G226000 Sobic003G392500--Sobic002G370300 Sobic003G392500--Sobic004G313800 Sobic009G010000--Sobic003G392500 Sobic009G010000--Sobic007G001600 Sobic009G010000--Sobic005G199300 Sobic009G010000--Sobic009G009900 Sobic009G010000--Sobic003G226000 Sobic009G010000--Sobic002G274900 Sobic009G010000--Sobic002G370300 Sobic009G010150 Sobic009G010150 Sobic009G010000--Sobic009G010150 Sobic009G010000--Sobic006G154300 Sobic005G199300--Sobic007G001600 Sobic005G199300--Sobic003G226000 Sobic005G199300--Sobic002G274900 Sobic005G199300--Sobic009G010000 Sobic005G199300--Sobic002G370300 Sobic005G199300--Sobic009G010150 Sobic002G362400 Sobic002G362400 Sobic005G199300--Sobic002G362400 Sobic005G199300--Sobic006G154300 Sobic005G199300--Sobic003G392500 Sobic007G001600--Sobic005G199300 Sobic007G001600--Sobic003G226000 Sobic007G001600--Sobic002G274900 Sobic007G001600--Sobic009G010000 Sobic007G001600--Sobic009G010150 Sobic007G001600--Sobic006G154300 Sobic007G001600--Sobic002G370300 Sobic007G001600--Sobic003G392500 Sobic007G001600--Sobic002G362400 Sobic002G370300--Sobic003G226000 Sobic002G370300--Sobic005G199300 Sobic003G101100 Sobic003G101100 Sobic002G370300--Sobic003G101100 Sobic002G370300--Sobic007G001600 Sobic002G370300--Sobic002G274900 Sobic002G370300--Sobic002G362400 Sobic002G370300--Sobic009G010000 Sobic002G370300--Sobic003G392500 Sobic002G370300--Sobic009G010150
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.