Gene annotation
| Transcriptome id | Sobic.002G258500.1 |
|---|---|
| Synonym | Sb02g029360 |
| Functional annotation | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543) acyl-desaturase, chloroplast precursor, putative, expressed |
| UniProt | A0A1B6QDI8 |
| Pfam | PF03405 |
| Panther DB | PTHR31155 PTHR31155:SF7 |
| NCBI CDD | - |
| KEGG Orthology | K03921; FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase |
| Gene Ontology | GO:0006631; fatty acid metabolic process |
Orthologs (automatic annotation)
| TAIR | AT3G02620 : Plant stearoyl-acyl-carrier-protein desaturase family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os03g30950.1 : acyl-desaturase, chloroplast precursor, putative, expressed |
| MaizeGDB (Corn) | Zm00025a047587 , Zm00025a018168 , Zm00025a039503 , Zm00025a003802 , Zm00025a003595 |
| Brachypodium | KQK23305 , KQJ90512 , KQK10887 |
| Barley | HORVU2Hr1G012600.2 , HORVU2Hr1G012780.1 , HORVU5Hr1G068310.1 , HORVU5Hr1G068310.2 , HORVU3Hr1G091320.2 , HORVU3Hr1G091320.3 , HORVU3Hr1G091320.1 |
| Wheat | TraesCS5A02G237800 , TraesCS2B02G090400 , TraesCS5B02G235800 , TraesCS3A02G408700 , TraesCS3D02G403800 , TraesCS7B02G102300 , TraesCS5A02G236800 , TraesCS2A02G075300 , TraesCS7A02G196500 , TraesCS2D02G074200 , TraesCS5A02G237000 , TraesCS2A02G075400 , TraesCS2D02G074000 , TraesCS5D02G244700 , TraesCS2A02G075500 , TraesCS5B02G235900 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.004G316000 | DEFL74 - Defensin and Defensin-like DEFL family, expressed | - |
| 2 | Sobic.002G023500 | expressed protein | - |
| 3 | Sobic.010G130900 | glycine rich protein family protein, putative, expressed | - |
| 4 | Sobic.002G346700 | GDSL-like lipase/acylhydrolase, putative, expressed | - |
| 5 | Sobic.007G014300 | DEF6 - Defensin and Defensin-like DEFL family, expressed | - |
| 6 | Sobic.001G123650 | - | - |
| 7 | Sobic.001G123650 | - | - |
| 8 | Sobic.001G123650 | - | - |
| 9 | Sobic.001G123650 | - | - |
| 10 | Sobic.001G123650 | - | - |
| 11 | Sobic.001G123650 | - | - |
| 12 | Sobic.001G123650 | - | - |
| 13 | Sobic.001G123650 | - | - |
| 14 | Sobic.001G123650 | - | - |
| 15 | Sobic.001G123650 | - | - |
| 16 | Sobic.001G123650 | - | - |
| 17 | Sobic.001G123650 | - | - |
| 18 | Sobic.001G123650 | - | - |
| 19 | Sobic.003G175700 | - | - |
| 20 | Sobic.006G239600 | - | - |
Gene co-expression network
Octagon: transcription factors
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