Gene annotation
Transcriptome id Sobic.002G350200.1
Synonym Sb02g037240
Functional annotation ubiquitin-like protein SMT3, putative, expressed
UniProt A0A1B6QF40
Pfam PF11976
Panther DB PTHR10562 PTHR10562:SF23
NCBI CDD KOG1769; Ubiquitin-like proteins
KEGG Orthology K12160; SUMO, small ubiquitin-related modifier
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G55856 : Ubiquitin-like superfamily protein
RAP-DB (Rice) LOC_Os07g38690.1 : ubiquitin-like protein SMT3, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G054401 - -
2 Sobic.004G120600 aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
3 Sobic.005G002100 protein kinase domain containing protein, expressed -
4 Sobic.003G111000 transporter family protein, putative, expressed -
5 Sobic.004G049300 transporter family protein, putative, expressed -
6 Sobic.010G034400 hydrolase, alpha/beta fold family protein, putative, expressed -
7 Sobic.001G094700 expressed protein -
8 Sobic.001G094700 expressed protein -
9 Sobic.001G094700 expressed protein -
10 Sobic.001G094700 expressed protein -
11 Sobic.001G094700 expressed protein -
12 Sobic.001G094700 expressed protein -
13 Sobic.001G094700 expressed protein -
14 Sobic.001G094700 expressed protein -
15 Sobic.001G094700 expressed protein -
16 Sobic.001G094700 expressed protein -
17 Sobic.001G094700 expressed protein -
18 Sobic.001G094700 expressed protein -
19 Sobic.001G094700 expressed protein -
20 Sobic.001G094700 expressed protein -


Gene co-expression network
sample Sobic002G350200 Sobic002G350200 Sobic005G054401 Sobic005G054401 Sobic002G350200--Sobic005G054401 Sobic004G120600 Sobic004G120600 Sobic002G350200--Sobic004G120600 Sobic005G002100 Sobic005G002100 Sobic002G350200--Sobic005G002100 Sobic003G111000 Sobic003G111000 Sobic002G350200--Sobic003G111000 Sobic004G049300 Sobic004G049300 Sobic002G350200--Sobic004G049300 Sobic010G034400 Sobic010G034400 Sobic002G350200--Sobic010G034400 Sobic001G094700 Sobic001G094700 Sobic002G350200--Sobic001G094700 Sobic010G107800 Sobic010G107800 Sobic005G054401--Sobic010G107800 Sobic001G269200 Sobic001G269200 Sobic005G054401--Sobic001G269200 Sobic007G129800 Sobic007G129800 Sobic005G054401--Sobic007G129800 Sobic002G414300 Sobic002G414300 Sobic005G054401--Sobic002G414300 Sobic001G269600 Sobic001G269600 Sobic005G054401--Sobic001G269600 Sobic007G167000 Sobic007G167000 Sobic005G054401--Sobic007G167000 Sobic001G269700 Sobic001G269700 Sobic005G054401--Sobic001G269700 Sobic002G414000 Sobic002G414000 Sobic005G054401--Sobic002G414000 Sobic005G220500 Sobic005G220500 Sobic005G054401--Sobic005G220500 Sobic004G120600--Sobic001G094700 Sobic005G026700 Sobic005G026700 Sobic005G002100--Sobic005G026700 Sobic003G164400 Sobic003G164400 Sobic005G002100--Sobic003G164400 Sobic005G002100--Sobic001G094700 Sobic006G236300 Sobic006G236300 Sobic003G111000--Sobic006G236300 Sobic005G110120 Sobic005G110120 Sobic003G111000--Sobic005G110120 Sobic009G091300 Sobic009G091300 Sobic003G111000--Sobic009G091300 Sobic003G246500 Sobic003G246500 Sobic003G111000--Sobic003G246500 Sobic009G169500 Sobic009G169500 Sobic003G111000--Sobic009G169500 Sobic006G195000 Sobic006G195000 Sobic003G111000--Sobic006G195000 Sobic010G162700 Sobic010G162700 Sobic003G111000--Sobic010G162700 Sobic001G306200 Sobic001G306200 Sobic003G111000--Sobic001G306200 Sobic005G142400 Sobic005G142400 Sobic003G111000--Sobic005G142400 Sobic004G217200 Sobic004G217200 Sobic004G049300--Sobic004G217200 Sobic005G204500 Sobic005G204500 Sobic004G049300--Sobic005G204500 Sobic004G049300--Sobic006G195000 Sobic005G006300 Sobic005G006300 Sobic004G049300--Sobic005G006300 Sobic006G142200 Sobic006G142200 Sobic004G049300--Sobic006G142200 Sobic003G394801 Sobic003G394801 Sobic004G049300--Sobic003G394801 Sobic009G016900 Sobic009G016900 Sobic004G049300--Sobic009G016900 Sobic004G049300--Sobic005G110120 Sobic002G303500 Sobic002G303500 Sobic004G049300--Sobic002G303500 Sobic010G034400--Sobic001G094700 Sobic001G094700--Sobic001G094700
Octagon: transcription factors


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