Gene annotation
Transcriptome id Sobic.002G397001.1
Synonym -
Functional annotation -
UniProt A0A1W0W7J7
Pfam PF08246 PF00112
Panther DB PTHR12411 PTHR12411:SF371
NCBI CDD KOG1542; Cysteine proteinase Cathepsin F KOG1543Cysteine proteinase Cathepsin L
KEGG Orthology -
Gene Ontology GO:0008234; cysteine-type peptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT5G50260 : Cysteine proteinases superfamily protein
RAP-DB (Rice) LOC_Os09g39110.1 : vignain precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G146800 late embryogenesis abundant protein, putative, expressed -
2 Sobic.009G072066 - -
3 Sobic.008G082450 - -
4 Sobic.010G140300 - -
5 Sobic.010G090550 - -
6 Sobic.006G089200 expressed protein -
7 Sobic.001G018700 RD26, putative, expressed -
8 Sobic.001G018700 RD26, putative, expressed -
9 Sobic.001G018700 RD26, putative, expressed -
10 Sobic.001G018700 RD26, putative, expressed -
11 Sobic.001G018700 RD26, putative, expressed -
12 Sobic.001G018700 RD26, putative, expressed -
13 Sobic.001G018700 RD26, putative, expressed -
14 Sobic.001G018700 RD26, putative, expressed -
15 Sobic.001G018700 RD26, putative, expressed -
16 Sobic.001G018700 RD26, putative, expressed -
17 Sobic.001G018700 RD26, putative, expressed -
18 Sobic.001G018700 RD26, putative, expressed -
19 Sobic.001G018700 RD26, putative, expressed -
20 Sobic.001G018700 RD26, putative, expressed -


Gene co-expression network
sample Sobic002G397001 Sobic002G397001 Sobic007G146800 Sobic007G146800 Sobic002G397001--Sobic007G146800 Sobic009G072066 Sobic009G072066 Sobic002G397001--Sobic009G072066 Sobic008G082450 Sobic008G082450 Sobic002G397001--Sobic008G082450 Sobic010G140300 Sobic010G140300 Sobic002G397001--Sobic010G140300 Sobic010G090550 Sobic010G090550 Sobic002G397001--Sobic010G090550 Sobic006G089200 Sobic006G089200 Sobic002G397001--Sobic006G089200 Sobic001G018700 Sobic001G018700 Sobic002G397001--Sobic001G018700 Sobic007G146800--Sobic010G140300 Sobic007G146800--Sobic008G082450 Sobic007G146800--Sobic006G089200 Sobic007G146800--Sobic001G018700 Sobic004G075301 Sobic004G075301 Sobic009G072066--Sobic004G075301 Sobic009G072066--Sobic001G018700 Sobic008G082450--Sobic010G140300 Sobic008G082450--Sobic001G018700 Sobic010G140300--Sobic008G082450 Sobic010G140300--Sobic001G018700 Sobic001G338200 Sobic001G338200 Sobic010G090550--Sobic001G338200 Sobic010G090550--Sobic001G018700 Sobic006G089200--Sobic001G018700 Sobic001G018700--Sobic001G018700
Octagon: transcription factors


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