Gene annotation
Transcriptome id Sobic.003G089400.1
Synonym Sb03g007530
Functional annotation seven in absentia protein family protein, putative, expressed
UniProt A0A1W0VWE7
Pfam PF03145
Panther DB PTHR10315 PTHR10315:SF43
NCBI CDD KOG3002; Zn finger protein
KEGG Orthology K04506; E3 ubiquitin-protein ligase SIAH1
Gene Ontology GO:0007275; multicellular organism development GO:0006511ubiquitin-dependent protein catabolic process GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT5G37870 : Protein with RING/U-box and TRAF-like domains
RAP-DB (Rice) LOC_Os01g03420.1 : seven in absentia protein family protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G371500 - -
2 Sobic.007G054300 harpin-induced protein 1 domain containing protein, expressed -
3 Sobic.008G048000 OsSAUR15 - Auxin-responsive SAUR gene family member -
4 Sobic.002G120850 - -
5 Sobic.002G044200 cytochrome P450, putative, expressed -
6 Sobic.005G067000 OsWAK91 - OsWAK receptor-like protein kinase, expressed -
7 Sobic.003G405400 OsFBX188 - F-box domain containing protein, expressed -
8 Sobic.001G539100 - -
9 Sobic.001G018700 RD26, putative, expressed -
10 Sobic.001G018700 RD26, putative, expressed -
11 Sobic.001G018700 RD26, putative, expressed -
12 Sobic.001G018700 RD26, putative, expressed -
13 Sobic.001G018700 RD26, putative, expressed -
14 Sobic.001G018700 RD26, putative, expressed -
15 Sobic.001G018700 RD26, putative, expressed -
16 Sobic.001G018700 RD26, putative, expressed -
17 Sobic.001G018700 RD26, putative, expressed -
18 Sobic.001G018700 RD26, putative, expressed -
19 Sobic.001G018700 RD26, putative, expressed -
20 Sobic.001G018700 RD26, putative, expressed -


Gene co-expression network
sample Sobic003G089400 Sobic003G089400 Sobic001G371500 Sobic001G371500 Sobic003G089400--Sobic001G371500 Sobic007G054300 Sobic007G054300 Sobic003G089400--Sobic007G054300 Sobic008G048000 Sobic008G048000 Sobic003G089400--Sobic008G048000 Sobic002G120850 Sobic002G120850 Sobic003G089400--Sobic002G120850 Sobic002G044200 Sobic002G044200 Sobic003G089400--Sobic002G044200 Sobic005G067000 Sobic005G067000 Sobic003G089400--Sobic005G067000 Sobic003G405400 Sobic003G405400 Sobic003G089400--Sobic003G405400 Sobic001G539100 Sobic001G539100 Sobic003G089400--Sobic001G539100 Sobic001G018700 Sobic001G018700 Sobic003G089400--Sobic001G018700 Sobic001G371500--Sobic007G054300 Sobic001G371500--Sobic003G089400 Sobic001G371500--Sobic001G018700 Sobic007G054300--Sobic001G371500 Sobic007G054300--Sobic003G089400 Sobic007G054300--Sobic008G048000 Sobic007G054300--Sobic001G018700 Sobic008G048000--Sobic003G089400 Sobic008G048000--Sobic001G371500 Sobic008G048000--Sobic007G054300 Sobic008G048000--Sobic002G120850 Sobic003G258000 Sobic003G258000 Sobic008G048000--Sobic003G258000 Sobic008G048000--Sobic002G044200 Sobic008G048000--Sobic005G067000 Sobic003G094850 Sobic003G094850 Sobic008G048000--Sobic003G094850 Sobic005G102750 Sobic005G102750 Sobic008G048000--Sobic005G102750 Sobic002G120850--Sobic003G089400 Sobic002G120850--Sobic008G048000 Sobic002G120850--Sobic007G054300 Sobic002G120850--Sobic001G371500 Sobic002G120850--Sobic003G258000 Sobic002G120850--Sobic005G067000 Sobic002G175000 Sobic002G175000 Sobic002G120850--Sobic002G175000 Sobic002G120850--Sobic002G044200 Sobic007G078400 Sobic007G078400 Sobic002G120850--Sobic007G078400 Sobic002G044200--Sobic001G371500 Sobic003G418600 Sobic003G418600 Sobic002G044200--Sobic003G418600 Sobic002G044200--Sobic007G054300 Sobic002G044200--Sobic001G018700 Sobic005G067000--Sobic001G371500 Sobic007G221300 Sobic007G221300 Sobic005G067000--Sobic007G221300 Sobic010G142132 Sobic010G142132 Sobic005G067000--Sobic010G142132 Sobic006G176300 Sobic006G176300 Sobic005G067000--Sobic006G176300 Sobic005G067000--Sobic007G078400 Sobic010G158300 Sobic010G158300 Sobic005G067000--Sobic010G158300 Sobic002G218350 Sobic002G218350 Sobic005G067000--Sobic002G218350 Sobic005G067000--Sobic007G054300 Sobic005G067000--Sobic001G018700 Sobic003G405400--Sobic001G539100 Sobic003G405400--Sobic001G018700 Sobic001G539100--Sobic003G405400 Sobic009G019301 Sobic009G019301 Sobic001G539100--Sobic009G019301 Sobic001G030800 Sobic001G030800 Sobic001G539100--Sobic001G030800 Sobic001G539100--Sobic002G218350 Sobic005G193900 Sobic005G193900 Sobic001G539100--Sobic005G193900 Sobic001G539100--Sobic001G018700 Sobic001G018700--Sobic001G018700
Octagon: transcription factors


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