Gene annotation
Transcriptome id Sobic.003G090100.1
Synonym
Functional annotation seven in absentia protein family domain containing protein, expressed
UniProt A0A1B6Q277
Pfam PF13920 PF03145
Panther DB PTHR10315 PTHR10315:SF30
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0007275; multicellular organism development GO:0006511ubiquitin-dependent protein catabolic process GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT5G37870 : Protein with RING/U-box and TRAF-like domains
RAP-DB (Rice) LOC_Os01g03290.1 : seven in absentia protein family domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQK02813
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G207900 zinc knuckle family protein, expressed -
2 Sobic.007G007250 - -
3 Sobic.008G028850 - -
4 Sobic.001G018700 RD26, putative, expressed -
5 Sobic.001G018700 RD26, putative, expressed -
6 Sobic.001G018700 RD26, putative, expressed -
7 Sobic.001G018700 RD26, putative, expressed -
8 Sobic.001G018700 RD26, putative, expressed -
9 Sobic.001G018700 RD26, putative, expressed -
10 Sobic.001G018700 RD26, putative, expressed -
11 Sobic.001G018700 RD26, putative, expressed -
12 Sobic.001G018700 RD26, putative, expressed -
13 Sobic.001G018700 RD26, putative, expressed -
14 Sobic.001G018700 RD26, putative, expressed -
15 Sobic.001G018700 RD26, putative, expressed -
16 Sobic.001G018700 RD26, putative, expressed -
17 Sobic.001G018700 RD26, putative, expressed -
18 Sobic.001G018700 RD26, putative, expressed -
19 Sobic.001G018700 RD26, putative, expressed -
20 Sobic.001G018700 RD26, putative, expressed -


Gene co-expression network
sample Sobic003G090100 Sobic003G090100 Sobic005G207900 Sobic005G207900 Sobic003G090100--Sobic005G207900 Sobic007G007250 Sobic007G007250 Sobic003G090100--Sobic007G007250 Sobic008G028850 Sobic008G028850 Sobic003G090100--Sobic008G028850 Sobic001G018700 Sobic001G018700 Sobic003G090100--Sobic001G018700 Sobic005G207900--Sobic003G090100 Sobic005G207900--Sobic001G018700 Sobic007G007250--Sobic005G207900 Sobic007G007250--Sobic003G090100 Sobic001G273600 Sobic001G273600 Sobic007G007250--Sobic001G273600 Sobic007G007250--Sobic001G018700 Sobic009G024166 Sobic009G024166 Sobic008G028850--Sobic009G024166 Sobic008G028850--Sobic003G090100 Sobic006G011700 Sobic006G011700 Sobic008G028850--Sobic006G011700 Sobic006G257250 Sobic006G257250 Sobic008G028850--Sobic006G257250 Sobic004G056350 Sobic004G056350 Sobic008G028850--Sobic004G056350 Sobic004G311550 Sobic004G311550 Sobic008G028850--Sobic004G311550 Sobic008G028850--Sobic005G207900 Sobic006G113700 Sobic006G113700 Sobic008G028850--Sobic006G113700 Sobic008G028850--Sobic007G007250 Sobic001G018700--Sobic001G018700
Octagon: transcription factors


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