Gene annotation
| Transcriptome id | Sobic.003G140500.1 |
|---|---|
| Synonym | Sb03g011970 |
| Functional annotation | 60S ribosomal protein L22-2, putative, expressed |
| UniProt | A0A1B6Q338 |
| Pfam | PF01776 |
| Panther DB | PTHR10064 |
| NCBI CDD | - |
| KEGG Orthology | K02891; RP-L22e, large subunit ribosomal protein L22e |
| Gene Ontology | GO:0006412; translation GO:0005840ribosome GO:0005622intracellular GO:0003735structural constituent of ribosome |
Orthologs (automatic annotation)
| TAIR | AT3G05560 : Ribosomal L22e protein family |
|---|---|
| RAP-DB (Rice) | LOC_Os03g22340.1 : 60S ribosomal protein L22-2, putative, expressed |
| MaizeGDB (Corn) | Zm00025a015421 , Zm00025a052402 , Zm00025a049131 |
| Brachypodium | KQK21750 , KQK14678 |
| Barley | HORVU7Hr1G080630.2 , HORVU7Hr1G080630.1 |
| Wheat | TraesCS7D02G335000 , TraesCS7B02G238600 , TraesCS2A02G110500 , TraesCS2B02G129300 , TraesCS2D02G111100 , TraesCS7A02G344500 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.009G128101 | - | - |
| 2 | Sobic.001G123650 | - | - |
| 3 | Sobic.001G123650 | - | - |
| 4 | Sobic.001G123650 | - | - |
| 5 | Sobic.001G123650 | - | - |
| 6 | Sobic.001G123650 | - | - |
| 7 | Sobic.001G123650 | - | - |
| 8 | Sobic.001G123650 | - | - |
| 9 | Sobic.001G123650 | - | - |
| 10 | Sobic.001G123650 | - | - |
| 11 | Sobic.001G123650 | - | - |
| 12 | Sobic.001G123650 | - | - |
| 13 | Sobic.001G123650 | - | - |
| 14 | Sobic.001G123650 | - | - |
| 15 | Sobic.006G239600 | - | - |
| 16 | Sobic.007G014300 | DEF6 - Defensin and Defensin-like DEFL family, expressed | - |
| 17 | Sobic.006G025200 | hypothetical protein | - |
| 18 | Sobic.003G175700 | - | - |
| 19 | Sobic.004G316000 | DEFL74 - Defensin and Defensin-like DEFL family, expressed | - |
| 20 | Sobic.010G130900 | glycine rich protein family protein, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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