Gene annotation
Transcriptome id Sobic.003G156000.1
Synonym ATCHITIV, Sb03g013610, EP3, ATEP3, CHIV
Functional annotation CHIT3 - Chitinase family protein precursor, expressed
UniProt C5XJT5
Pfam PF00187 PF00182
Panther DB PTHR22595 PTHR22595:SF60
NCBI CDD KOG4742; Predicted chitinase
KEGG Orthology K01183; chitinase
Gene Ontology GO:0008061; chitin binding GO:0016998cell wall macromolecule catabolic process GO:0006032chitin catabolic process GO:0004568chitinase activity


Orthologs (automatic annotation)
TAIR AT3G54420 : homolog of carrot EP3-3 chitinase
RAP-DB (Rice) LOC_Os04g41680.1 : CHIT3 - Chitinase family protein precursor, expressed
MaizeGDB (Corn) Zm00025a036179 , Zm00025a010854 , Zm00025a010853
Brachypodium KQJ83350
Barley HORVU0Hr1G016310.1 , HORVU0Hr1G016310.3 , HORVU0Hr1G016310.2 , HORVU0Hr1G016310.4
Wheat TraesCS6A02G216100 , TraesCS6B02G246800 , TraesCS6D02G199500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G305300 expressed protein -
2 Sobic.004G000900 expressed protein -
3 Sobic.008G079650 - -
4 Sobic.010G179300 - -
5 Sobic.005G184800 - -
6 Sobic.001G122600 expressed protein -
7 Sobic.001G122600 expressed protein -
8 Sobic.001G122600 expressed protein -
9 Sobic.001G122600 expressed protein -
10 Sobic.001G122600 expressed protein -
11 Sobic.001G122600 expressed protein -
12 Sobic.001G122600 expressed protein -
13 Sobic.001G122600 expressed protein -
14 Sobic.001G122600 expressed protein -
15 Sobic.001G122600 expressed protein -
16 Sobic.001G122600 expressed protein -
17 Sobic.001G122600 expressed protein -
18 Sobic.001G122600 expressed protein -
19 Sobic.001G122600 expressed protein -
20 Sobic.001G122600 expressed protein -


Gene co-expression network
sample Sobic003G156000 Sobic003G156000 Sobic002G305300 Sobic002G305300 Sobic003G156000--Sobic002G305300 Sobic004G000900 Sobic004G000900 Sobic003G156000--Sobic004G000900 Sobic008G079650 Sobic008G079650 Sobic003G156000--Sobic008G079650 Sobic010G179300 Sobic010G179300 Sobic003G156000--Sobic010G179300 Sobic005G184800 Sobic005G184800 Sobic003G156000--Sobic005G184800 Sobic001G122600 Sobic001G122600 Sobic003G156000--Sobic001G122600 Sobic002G305300--Sobic010G179300 Sobic002G305300--Sobic001G122600 Sobic001G165600 Sobic001G165600 Sobic004G000900--Sobic001G165600 Sobic010G125000 Sobic010G125000 Sobic004G000900--Sobic010G125000 Sobic002G211300 Sobic002G211300 Sobic004G000900--Sobic002G211300 Sobic002G197700 Sobic002G197700 Sobic004G000900--Sobic002G197700 Sobic006G167700 Sobic006G167700 Sobic004G000900--Sobic006G167700 Sobic008G159000 Sobic008G159000 Sobic004G000900--Sobic008G159000 Sobic001G166900 Sobic001G166900 Sobic004G000900--Sobic001G166900 Sobic001G344300 Sobic001G344300 Sobic004G000900--Sobic001G344300 Sobic003G372600 Sobic003G372600 Sobic004G000900--Sobic003G372600 Sobic004G329600 Sobic004G329600 Sobic008G079650--Sobic004G329600 Sobic008G079650--Sobic004G000900 Sobic009G029300 Sobic009G029300 Sobic008G079650--Sobic009G029300 Sobic001G164800 Sobic001G164800 Sobic008G079650--Sobic001G164800 Sobic002G394900 Sobic002G394900 Sobic008G079650--Sobic002G394900 Sobic006G234433 Sobic006G234433 Sobic008G079650--Sobic006G234433 Sobic008G079650--Sobic001G166900 Sobic008G079650--Sobic001G122600 Sobic005G147600 Sobic005G147600 Sobic010G179300--Sobic005G147600 Sobic001G125400 Sobic001G125400 Sobic010G179300--Sobic001G125400 Sobic010G179300--Sobic001G165600 Sobic010G179300--Sobic006G234433 Sobic010G179300--Sobic001G122600 Sobic005G184800--Sobic001G122600 Sobic001G122600--Sobic001G122600
Octagon: transcription factors


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