Gene annotation
Transcriptome id Sobic.003G179700.1
Synonym Sb03g023500, BGAL7
Functional annotation beta-galactosidase precursor, putative, expressed
UniProt C5XM98
Pfam PF02140 PF13364 PF01301
Panther DB PTHR23421 PTHR23421:SF68
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G20710 : beta-galactosidase 7
RAP-DB (Rice) LOC_Os01g34920.1 : beta-galactosidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a050904 , Zm00025a027498
Brachypodium KQK00444 , PNT72151
Barley HORVU2Hr1G057440.2 , HORVU2Hr1G057440.3 , HORVU2Hr1G057440.4 , HORVU1Hr1G003210.2 , HORVU1Hr1G003200.4 , HORVU1Hr1G003200.1 , HORVU1Hr1G003210.1 , HORVU1Hr1G003210.3 , HORVU1Hr1G003200.2 , HORVU1Hr1G003200.3
Wheat TraesCS6B02G214100 , TraesCS6B02G214100 , TraesCS1A02G024100 , TraesCS1D02G024200 , TraesCS7D02G359500
Populus PNT41509 , PNT41510


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G073300 OsSCP38 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
2 Sobic.002G129600 LTPL62 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
3 Sobic.003G206200 THION27 - Plant thionin family protein precursor, expressed -
4 Sobic.004G159200 LEML2 - Anther-specific LEM1 family protein precursor, expressed -
5 Sobic.004G090700 - -
6 Sobic.003G413400 LEML1 - Anther-specific LEM1 family protein precursor, expressed -
7 Sobic.003G162500 expressed protein -
8 Sobic.003G206300 THION27 - Plant thionin family protein precursor, expressed -
9 Sobic.007G064600 cytochrome P450, putative, expressed -
10 Sobic.009G116300 OsSub46 - Putative Subtilisin homologue, expressed -
11 Sobic.003G239400 wax synthase isoform 3, putative, expressed -
12 Sobic.010G200000 triacylglycerol lipase precursor, putative, expressed K01052: lysosomal acid lipase/cholesteryl ester hydrolase
13 Sobic.003G206000 THION27 - Plant thionin family protein precursor, expressed -
14 Sobic.001G332050 - -
15 Sobic.001G332050 - -
16 Sobic.001G332050 - -
17 Sobic.001G332050 - -
18 Sobic.001G332050 - -
19 Sobic.001G332050 - -
20 Sobic.001G332050 - -


Gene co-expression network
sample Sobic003G179700 Sobic003G179700 Sobic007G073300 Sobic007G073300 Sobic003G179700--Sobic007G073300 Sobic002G129600 Sobic002G129600 Sobic003G179700--Sobic002G129600 Sobic003G206200 Sobic003G206200 Sobic003G179700--Sobic003G206200 Sobic004G159200 Sobic004G159200 Sobic003G179700--Sobic004G159200 Sobic004G090700 Sobic004G090700 Sobic003G179700--Sobic004G090700 Sobic003G413400 Sobic003G413400 Sobic003G179700--Sobic003G413400 Sobic003G162500 Sobic003G162500 Sobic003G179700--Sobic003G162500 Sobic003G206300 Sobic003G206300 Sobic003G179700--Sobic003G206300 Sobic007G064600 Sobic007G064600 Sobic003G179700--Sobic007G064600 Sobic007G073300--Sobic002G129600 Sobic007G073300--Sobic003G413400 Sobic007G073300--Sobic004G159200 Sobic003G239400 Sobic003G239400 Sobic007G073300--Sobic003G239400 Sobic007G073300--Sobic003G206200 Sobic007G073300--Sobic004G090700 Sobic007G073300--Sobic003G206300 Sobic008G138300 Sobic008G138300 Sobic007G073300--Sobic008G138300 Sobic009G116300 Sobic009G116300 Sobic007G073300--Sobic009G116300 Sobic002G129600--Sobic003G413400 Sobic002G129600--Sobic004G159200 Sobic002G129600--Sobic003G206300 Sobic002G129600--Sobic003G206200 Sobic002G129600--Sobic004G090700 Sobic002G129600--Sobic009G116300 Sobic010G200000 Sobic010G200000 Sobic002G129600--Sobic010G200000 Sobic003G206000 Sobic003G206000 Sobic002G129600--Sobic003G206000 Sobic001G332050 Sobic001G332050 Sobic002G129600--Sobic001G332050 Sobic003G206200--Sobic004G090700 Sobic003G206200--Sobic004G159200 Sobic003G206200--Sobic003G413400 Sobic003G206200--Sobic002G129600 Sobic003G206200--Sobic003G206300 Sobic003G206200--Sobic008G138300 Sobic003G206200--Sobic007G073300 Sobic003G206200--Sobic003G162500 Sobic003G206200--Sobic009G116300 Sobic004G159200--Sobic003G413400 Sobic004G159200--Sobic003G206200 Sobic004G159200--Sobic004G090700 Sobic004G159200--Sobic002G129600 Sobic004G159200--Sobic003G206300 Sobic004G159200--Sobic008G138300 Sobic004G159200--Sobic009G116300 Sobic004G159200--Sobic007G073300 Sobic004G159200--Sobic010G200000 Sobic004G090700--Sobic003G206200 Sobic004G090700--Sobic004G159200 Sobic004G090700--Sobic003G413400 Sobic004G090700--Sobic002G129600 Sobic004G090700--Sobic003G206300 Sobic004G090700--Sobic008G138300 Sobic004G090700--Sobic003G162500 Sobic004G090700--Sobic007G073300 Sobic004G090700--Sobic009G116300 Sobic003G413400--Sobic004G159200 Sobic003G413400--Sobic003G206200 Sobic003G413400--Sobic004G090700 Sobic003G413400--Sobic002G129600 Sobic003G413400--Sobic003G206300 Sobic003G413400--Sobic008G138300 Sobic003G413400--Sobic009G116300 Sobic003G413400--Sobic010G200000 Sobic003G413400--Sobic007G073300 Sobic003G162500--Sobic004G090700 Sobic008G189800 Sobic008G189800 Sobic003G162500--Sobic008G189800 Sobic003G162500--Sobic003G206200 Sobic003G162500--Sobic004G159200 Sobic003G162500--Sobic003G413400 Sobic006G251301 Sobic006G251301 Sobic003G162500--Sobic006G251301 Sobic003G206100 Sobic003G206100 Sobic003G162500--Sobic003G206100 Sobic003G162500--Sobic008G138300 Sobic003G162500--Sobic002G129600 Sobic003G206300--Sobic009G116300 Sobic003G206300--Sobic010G200000 Sobic003G206300--Sobic001G332050 Sobic007G064600--Sobic003G239400 Sobic007G064600--Sobic010G200000 Sobic007G064600--Sobic003G206000 Sobic007G064600--Sobic001G332050
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.