Gene annotation
Transcriptome id Sobic.003G261700.1
Synonym ATIPT1, Sb03g031570, IPT1
Functional annotation IPP transferase, putative, expressed
UniProt A0A1B6Q5F3
Pfam PF01715
Panther DB PTHR11088 PTHR11088:SF27
NCBI CDD KOG1384; tRNA delta(2)-isopentenylpyrophosphate transferase
KEGG Orthology K10760; adenylate dimethylallyltransferase (cytokinin synthase)
Gene Ontology GO:0008033; tRNA processing


Orthologs (automatic annotation)
TAIR AT1G68460 : isopentenyltransferase 1
RAP-DB (Rice) LOC_Os01g49390.1 : IPP transferase, putative, expressed
MaizeGDB (Corn) Zm00025a038849 , Zm00025a044474 , Zm00025a057317 , Zm00025a027984
Brachypodium PNT72608 , KQK05019
Barley HORVU3Hr1G063960.1 , HORVU1Hr1G083530.2 , HORVU1Hr1G083530.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G141550 - -
2 Sobic.010G206100 expressed protein -
3 Sobic.009G150100 expressed protein -
4 Sobic.005G082950 - -
5 Sobic.007G100275 - -
6 Sobic.003G353050 - -
7 Sobic.003G058400 annexin, putative, expressed -
8 Sobic.008G085200 - -
9 Sobic.002G333200 OsFBX248 - F-box domain containing protein, expressed -
10 Sobic.003G049100 prolyl 4-hydroxylase, putative, expressed K00472: prolyl 4-hydroxylase
11 Sobic.003G091100 seven in absentia protein family domain containing protein, expressed -
12 Sobic.K042700 OsMADS70 - MADS-box family gene with M-alpha type-box, expressed -
13 Sobic.004G203666 - -
14 Sobic.001G218701 - -
15 Sobic.008G192200 - -
16 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
17 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
18 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
19 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
20 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic003G261700 Sobic003G261700 Sobic003G141550 Sobic003G141550 Sobic003G261700--Sobic003G141550 Sobic010G206100 Sobic010G206100 Sobic003G261700--Sobic010G206100 Sobic009G150100 Sobic009G150100 Sobic003G261700--Sobic009G150100 Sobic005G082950 Sobic005G082950 Sobic003G261700--Sobic005G082950 Sobic007G100275 Sobic007G100275 Sobic003G261700--Sobic007G100275 Sobic003G353050 Sobic003G353050 Sobic003G261700--Sobic003G353050 Sobic003G058400 Sobic003G058400 Sobic003G261700--Sobic003G058400 Sobic008G085200 Sobic008G085200 Sobic003G261700--Sobic008G085200 Sobic002G333200 Sobic002G333200 Sobic003G261700--Sobic002G333200 Sobic003G141550--Sobic003G058400 Sobic003G141550--Sobic005G082950 Sobic010G229200 Sobic010G229200 Sobic003G141550--Sobic010G229200 Sobic001G272300 Sobic001G272300 Sobic003G141550--Sobic001G272300 Sobic004G203666 Sobic004G203666 Sobic010G206100--Sobic004G203666 Sobic009G202101 Sobic009G202101 Sobic010G206100--Sobic009G202101 Sobic001G107700 Sobic001G107700 Sobic010G206100--Sobic001G107700 Sobic008G192200 Sobic008G192200 Sobic010G206100--Sobic008G192200 Sobic010G206100--Sobic001G272300 Sobic009G150100--Sobic007G100275 Sobic003G091100 Sobic003G091100 Sobic009G150100--Sobic003G091100 SobicK042700 SobicK042700 Sobic009G150100--SobicK042700 Sobic009G150100--Sobic001G272300 Sobic005G082950--Sobic001G272300 Sobic007G100275--Sobic003G091100 Sobic007G100275--SobicK042700 Sobic007G100275--Sobic009G150100 Sobic007G100275--Sobic001G272300 Sobic001G025201 Sobic001G025201 Sobic003G353050--Sobic001G025201 Sobic002G069601 Sobic002G069601 Sobic003G353050--Sobic002G069601 Sobic003G286650 Sobic003G286650 Sobic003G353050--Sobic003G286650 Sobic003G353050--Sobic002G333200 Sobic006G259501 Sobic006G259501 Sobic003G353050--Sobic006G259501 Sobic003G353050--Sobic008G192200 Sobic003G353050--Sobic001G272300 Sobic003G058400--Sobic001G272300 Sobic008G085200--Sobic010G206100 Sobic008G085200--Sobic004G203666 Sobic008G085200--Sobic009G202101 Sobic008G085200--Sobic009G150100 Sobic008G085200--Sobic007G100275 Sobic004G023733 Sobic004G023733 Sobic008G085200--Sobic004G023733 Sobic009G147100 Sobic009G147100 Sobic008G085200--Sobic009G147100 Sobic008G085200--Sobic001G107700 Sobic008G085200--SobicK042700 Sobic002G333200--Sobic003G353050 Sobic008G192100 Sobic008G192100 Sobic002G333200--Sobic008G192100 Sobic002G302400 Sobic002G302400 Sobic002G333200--Sobic002G302400 Sobic010G262650 Sobic010G262650 Sobic002G333200--Sobic010G262650 Sobic002G333200--Sobic008G192200 Sobic002G333200--Sobic001G272300
Octagon: transcription factors


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