Gene annotation
Transcriptome id Sobic.004G094900.2
Synonym
Functional annotation expressed protein
UniProt A0A1Z5RLN6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g71910.1 : transposon protein, putative, CACTA, En/Spm sub-class, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G381400 expressed protein -
2 Sobic.002G390000 dirigent, putative, expressed -
3 Sobic.007G100032 - -
4 Sobic.008G079500 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
5 Sobic.002G090100 - -
6 Sobic.002G090100 - -
7 Sobic.002G090100 - -
8 Sobic.002G090100 - -
9 Sobic.002G090100 - -
10 Sobic.002G090100 - -
11 Sobic.007G039500 aquaporin protein, putative, expressed K09874: aquaporin NIP
12 Sobic.006G053900 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR3 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
13 Sobic.001G065900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
14 Sobic.002G388800 cytochrome P450 72A1, putative, expressed -
15 Sobic.005G171001 - -
16 Sobic.002G102132 - -
17 Sobic.004G263100 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
18 Sobic.002G403833 - -
19 Sobic.001G197300 kinase, putative, expressed -
20 Sobic.007G159100 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@tetraspanin family protein, putative, expressed -


Gene co-expression network
sample Sobic004G094900 Sobic004G094900 Sobic001G381400 Sobic001G381400 Sobic004G094900--Sobic001G381400 Sobic002G390000 Sobic002G390000 Sobic004G094900--Sobic002G390000 Sobic007G100032 Sobic007G100032 Sobic004G094900--Sobic007G100032 Sobic008G079500 Sobic008G079500 Sobic004G094900--Sobic008G079500 Sobic002G090100 Sobic002G090100 Sobic004G094900--Sobic002G090100 Sobic001G381400--Sobic002G090100 Sobic001G381400--Sobic004G094900 Sobic001G381400--Sobic002G390000 Sobic007G159100 Sobic007G159100 Sobic001G381400--Sobic007G159100 Sobic002G238600 Sobic002G238600 Sobic002G390000--Sobic002G238600 Sobic002G390000--Sobic001G381400 Sobic002G390000--Sobic004G094900 Sobic002G390000--Sobic002G090100 Sobic001G197300 Sobic001G197300 Sobic007G100032--Sobic001G197300 Sobic007G100032--Sobic004G094900 Sobic010G136400 Sobic010G136400 Sobic007G100032--Sobic010G136400 Sobic007G100032--Sobic001G381400 Sobic001G065900 Sobic001G065900 Sobic007G100032--Sobic001G065900 Sobic006G063400 Sobic006G063400 Sobic007G100032--Sobic006G063400 Sobic007G100032--Sobic008G079500 Sobic003G060100 Sobic003G060100 Sobic007G100032--Sobic003G060100 Sobic007G101900 Sobic007G101900 Sobic007G100032--Sobic007G101900 Sobic008G079500--Sobic001G381400 Sobic008G079500--Sobic002G090100 Sobic008G079500--Sobic007G159100 Sobic008G079500--Sobic004G094900 Sobic002G090100--Sobic002G090100 Sobic002G090100--Sobic001G381400 Sobic002G090100--Sobic007G159100 Sobic002G102132 Sobic002G102132 Sobic002G090100--Sobic002G102132 Sobic004G263100 Sobic004G263100 Sobic002G090100--Sobic004G263100
Octagon: transcription factors


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