Gene annotation
| Transcriptome id | Sobic.004G153300.1 |
|---|---|
| Synonym | SSI2, FAB2, Sb04g020500 |
| Functional annotation | acyl-desaturase, chloroplast precursor, putative, expressed |
| UniProt | A0A194YPZ1 |
| Pfam | PF03405 |
| Panther DB | PTHR31155 PTHR31155:SF8 |
| NCBI CDD | - |
| KEGG Orthology | K03921; FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase |
| Gene Ontology | GO:0006631; fatty acid metabolic process |
Orthologs (automatic annotation)
| TAIR | AT2G43710 : Plant stearoyl-acyl-carrier-protein desaturase family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os04g31070.1 : acyl-desaturase, chloroplast precursor, putative, expressed |
| MaizeGDB (Corn) | Zm00025a039503 , Zm00025a026276 , Zm00025a055823 , Zm00025a031382 |
| Brachypodium | KQK23305 , KQK10887 |
| Barley | HORVU5Hr1G039730.2 , HORVU2Hr1G006990.1 , HORVU3Hr1G091320.2 , HORVU3Hr1G091320.3 , HORVU3Hr1G091320.1 , HORVU2Hr1G012600.1 , HORVU2Hr1G012600.2 , HORVU5Hr1G039730.5 , HORVU5Hr1G039730.4 , HORVU5Hr1G039730.6 , HORVU5Hr1G039730.1 , HORVU5Hr1G039730.3 , HORVU2Hr1G012780.1 , HORVU5Hr1G068310.1 , HORVU5Hr1G068310.2 |
| Wheat | TraesCS2D02G074000 , TraesCS3A02G408700 , TraesCS3D02G403800 , TraesCS3A02G426800 , TraesCS3A02G426800 , TraesCS3A02G426800 , TraesCS2A02G075300 , TraesCS3D02G421700 , TraesCS5D02G548700 , TraesCS5D02G244700 , TraesCS4A02G326700 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G266500 | LTPL37 - Protease inhibitor/seed storage/LTP family protein precursor, expressed | - |
| 2 | Sobic.007G064600 | cytochrome P450, putative, expressed | - |
| 3 | Sobic.003G206000 | THION27 - Plant thionin family protein precursor, expressed | - |
| 4 | Sobic.003G239400 | wax synthase isoform 3, putative, expressed | - |
| 5 | Sobic.002G129700 | LTPL62 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed | - |
| 6 | Sobic.001G332050 | - | - |
| 7 | Sobic.001G332050 | - | - |
| 8 | Sobic.001G332050 | - | - |
| 9 | Sobic.001G332050 | - | - |
| 10 | Sobic.001G332050 | - | - |
| 11 | Sobic.001G332050 | - | - |
| 12 | Sobic.001G332050 | - | - |
| 13 | Sobic.001G332050 | - | - |
| 14 | Sobic.001G332050 | - | - |
| 15 | Sobic.001G332050 | - | - |
| 16 | Sobic.001G332050 | - | - |
| 17 | Sobic.001G332050 | - | - |
| 18 | Sobic.001G332050 | - | - |
| 19 | Sobic.001G332050 | - | - |
| 20 | Sobic.001G332050 | - | - |
Gene co-expression network
Octagon: transcription factors
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