Gene annotation
Transcriptome id Sobic.004G235900.1
Synonym TT10, Sb04g027850, LAC15, ATLAC15
Functional annotation laccase precursor protein, putative, expressed
UniProt A0A1Z5RPA1
Pfam PF00394 PF07731 PF07732
Panther DB PTHR11709 PTHR11709:SF118
NCBI CDD -
KEGG Orthology K05909; laccase
Gene Ontology GO:0016491; oxidoreductase activity GO:0005507copper ion binding


Orthologs (automatic annotation)
TAIR AT5G48100 : Laccase/Diphenol oxidase family protein
RAP-DB (Rice) LOC_Os11g47390.1 : laccase precursor protein, putative, expressed
MaizeGDB (Corn) Zm00025a022105 , Zm00025a039673 , Zm00025a033185 , Zm00025a027016
Brachypodium KQK22086
Barley HORVU7Hr1G083090.3 , HORVU7Hr1G083090.2 , HORVU7Hr1G083090.1 , HORVU7Hr1G083090.5 , HORVU7Hr1G083090.4
Wheat TraesCS7B02G248800 , TraesCS6D02G284100 , TraesCS7A02G337400 , TraesCS7D02G345000 , TraesCS6A02G304900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G026300 transferase family protein, putative, expressed -
2 Sobic.002G057550 - -
3 Sobic.004G023733 - -
4 Sobic.002G069601 - -
5 Sobic.002G035766 - -
6 Sobic.006G236100 - -
7 Sobic.005G082950 - -
8 Sobic.008G148700 B3 DNA binding domain containing protein, expressed -
9 Sobic.003G141550 - -
10 Sobic.001G218701 - -
11 Sobic.003G058400 annexin, putative, expressed -
12 Sobic.001G267950 - -
13 Sobic.008G192200 - -
14 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
15 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
16 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
17 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
18 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
19 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
20 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic004G235900 Sobic004G235900 Sobic005G026300 Sobic005G026300 Sobic004G235900--Sobic005G026300 Sobic002G057550 Sobic002G057550 Sobic004G235900--Sobic002G057550 Sobic004G023733 Sobic004G023733 Sobic004G235900--Sobic004G023733 Sobic002G069601 Sobic002G069601 Sobic004G235900--Sobic002G069601 Sobic002G035766 Sobic002G035766 Sobic004G235900--Sobic002G035766 Sobic006G236100 Sobic006G236100 Sobic004G235900--Sobic006G236100 Sobic005G082950 Sobic005G082950 Sobic004G235900--Sobic005G082950 Sobic008G148700 Sobic008G148700 Sobic004G235900--Sobic008G148700 Sobic003G141550 Sobic003G141550 Sobic004G235900--Sobic003G141550 Sobic005G026300--Sobic004G235900 Sobic005G156800 Sobic005G156800 Sobic005G026300--Sobic005G156800 Sobic002G380750 Sobic002G380750 Sobic005G026300--Sobic002G380750 Sobic010G021600 Sobic010G021600 Sobic005G026300--Sobic010G021600 Sobic005G026300--Sobic002G057550 Sobic001G452400 Sobic001G452400 Sobic005G026300--Sobic001G452400 Sobic005G026300--Sobic008G148700 Sobic003G162200 Sobic003G162200 Sobic005G026300--Sobic003G162200 Sobic007G139950 Sobic007G139950 Sobic005G026300--Sobic007G139950 Sobic003G291050 Sobic003G291050 Sobic002G057550--Sobic003G291050 Sobic002G302400 Sobic002G302400 Sobic002G057550--Sobic002G302400 Sobic001G272300 Sobic001G272300 Sobic002G057550--Sobic001G272300 Sobic004G023733--Sobic002G035766 Sobic004G023733--Sobic001G272300 Sobic003G318400 Sobic003G318400 Sobic002G069601--Sobic003G318400 Sobic005G181700 Sobic005G181700 Sobic002G069601--Sobic005G181700 Sobic007G059800 Sobic007G059800 Sobic002G069601--Sobic007G059800 Sobic001G025201 Sobic001G025201 Sobic002G069601--Sobic001G025201 Sobic003G353050 Sobic003G353050 Sobic002G069601--Sobic003G353050 Sobic008G192200 Sobic008G192200 Sobic002G069601--Sobic008G192200 Sobic002G069601--Sobic001G272300 Sobic002G035766--Sobic004G023733 Sobic002G035766--Sobic001G272300 Sobic001G379800 Sobic001G379800 Sobic006G236100--Sobic001G379800 Sobic004G196000 Sobic004G196000 Sobic006G236100--Sobic004G196000 Sobic001G493300 Sobic001G493300 Sobic006G236100--Sobic001G493300 Sobic006G236100--Sobic002G069601 Sobic006G236100--Sobic008G192200 Sobic006G236100--Sobic004G023733 Sobic006G236100--Sobic002G035766 Sobic006G236100--Sobic003G141550 Sobic003G058400 Sobic003G058400 Sobic006G236100--Sobic003G058400 Sobic005G082950--Sobic001G272300 Sobic008G148700--Sobic002G057550 Sobic008G148700--Sobic001G272300 Sobic003G141550--Sobic003G058400 Sobic003G141550--Sobic005G082950 Sobic010G229200 Sobic010G229200 Sobic003G141550--Sobic010G229200 Sobic003G141550--Sobic001G272300
Octagon: transcription factors


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