Gene annotation
Transcriptome id Sobic.004G254200.1
Synonym Sb04g029320, SBH1
Functional annotation sphingolipid C4-hydroxylase SUR2, putative, expressed
UniProt A0A194YRN0
Pfam PF04116
Panther DB PTHR11863 PTHR11863:SF52
NCBI CDD KOG0874; Sphingolipid hydroxylase
KEGG Orthology K04713; sphinganine C4-monooxygenase
Gene Ontology GO:0016491; oxidoreductase activity GO:0006633fatty acid biosynthetic process GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT1G14290 : sphingoid base hydroxylase 2
RAP-DB (Rice) LOC_Os06g12250.1 : sphingolipid C4-hydroxylase SUR2, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G408700 expressed protein -
2 Sobic.010G141700 FAR1 family protein, expressed -
3 Sobic.001G507933 - -
4 Sobic.008G177700 strictosidine synthase, putative, expressed -
5 Sobic.003G242500 expressed protein -
6 Sobic.002G430601 - -
7 Sobic.001G018700 RD26, putative, expressed -
8 Sobic.001G018700 RD26, putative, expressed -
9 Sobic.001G018700 RD26, putative, expressed -
10 Sobic.001G018700 RD26, putative, expressed -
11 Sobic.001G018700 RD26, putative, expressed -
12 Sobic.001G018700 RD26, putative, expressed -
13 Sobic.001G018700 RD26, putative, expressed -
14 Sobic.001G018700 RD26, putative, expressed -
15 Sobic.001G018700 RD26, putative, expressed -
16 Sobic.001G018700 RD26, putative, expressed -
17 Sobic.001G018700 RD26, putative, expressed -
18 Sobic.001G018700 RD26, putative, expressed -
19 Sobic.001G018700 RD26, putative, expressed -
20 Sobic.001G018700 RD26, putative, expressed -


Gene co-expression network
sample Sobic004G254200 Sobic004G254200 Sobic003G408700 Sobic003G408700 Sobic004G254200--Sobic003G408700 Sobic010G141700 Sobic010G141700 Sobic004G254200--Sobic010G141700 Sobic001G507933 Sobic001G507933 Sobic004G254200--Sobic001G507933 Sobic008G177700 Sobic008G177700 Sobic004G254200--Sobic008G177700 Sobic003G242500 Sobic003G242500 Sobic004G254200--Sobic003G242500 Sobic002G430601 Sobic002G430601 Sobic004G254200--Sobic002G430601 Sobic001G018700 Sobic001G018700 Sobic004G254200--Sobic001G018700 Sobic003G408700--Sobic004G254200 Sobic003G408700--Sobic010G141700 Sobic003G408700--Sobic001G507933 Sobic003G408700--Sobic008G177700 Sobic003G408700--Sobic003G242500 Sobic003G408700--Sobic002G430601 Sobic003G408700--Sobic001G018700 Sobic010G141700--Sobic003G408700 Sobic010G141700--Sobic004G254200 Sobic010G141700--Sobic001G507933 Sobic010G141700--Sobic008G177700 Sobic010G141700--Sobic003G242500 Sobic010G141700--Sobic002G430601 Sobic010G141700--Sobic001G018700 Sobic001G507933--Sobic004G254200 Sobic001G507933--Sobic003G408700 Sobic001G507933--Sobic010G141700 Sobic001G507933--Sobic008G177700 Sobic001G507933--Sobic003G242500 Sobic001G507933--Sobic002G430601 Sobic001G507933--Sobic001G018700 Sobic008G177700--Sobic003G242500 Sobic008G177700--Sobic001G507933 Sobic008G177700--Sobic004G254200 Sobic008G177700--Sobic003G408700 Sobic008G177700--Sobic010G141700 Sobic001G030800 Sobic001G030800 Sobic008G177700--Sobic001G030800 Sobic008G177700--Sobic001G018700 Sobic003G242500--Sobic008G177700 Sobic003G242500--Sobic001G507933 Sobic003G242500--Sobic001G030800 Sobic003G242500--Sobic001G018700 Sobic003G262000 Sobic003G262000 Sobic002G430601--Sobic003G262000 Sobic003G020900 Sobic003G020900 Sobic002G430601--Sobic003G020900 Sobic001G129750 Sobic001G129750 Sobic002G430601--Sobic001G129750 Sobic003G072100 Sobic003G072100 Sobic002G430601--Sobic003G072100 Sobic002G430601--Sobic003G242500 Sobic001G183900 Sobic001G183900 Sobic002G430601--Sobic001G183900 Sobic006G190950 Sobic006G190950 Sobic002G430601--Sobic006G190950 Sobic002G430601--Sobic001G018700 Sobic001G018700--Sobic001G018700
Octagon: transcription factors


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