Gene annotation
Transcriptome id Sobic.004G318800.1
Synonym Sb04g034960
Functional annotation SMP-30/Gluconolaconase/LRE-like region containing protein, expressed
UniProt C5XTM4
Pfam PF03088
Panther DB PTHR10426 PTHR10426:SF28
NCBI CDD KOG1520; Predicted alkaloid synthase/Surface mucin Hemomucin
KEGG Orthology -
Gene Ontology GO:0016844; strictosidine synthase activity GO:0009058biosynthetic process


Orthologs (automatic annotation)
TAIR AT3G57030 : Calcium-dependent phosphotriesterase superfamily protein
RAP-DB (Rice) LOC_Os06g41850.1 : SMP-30/Gluconolaconase/LRE-like region containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQK21204 , KQK10870
Barley HORVU2Hr1G013460.2 , HORVU2Hr1G013460.1 , HORVU2Hr1G012970.4 , HORVU2Hr1G012970.3 , HORVU2Hr1G012970.2 , HORVU6Hr1G026020.2 , HORVU6Hr1G026020.3 , HORVU6Hr1G026020.1
Wheat TraesCS2A02G078000 , TraesCS2D02G076300 , TraesCS2D02G076000 , TraesCS2D02G076200 , TraesCS2A02G260200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G076100 transferase family protein, putative, expressed -
2 Sobic.006G079500 AMP-binding domain containing protein, expressed -
3 Sobic.001G341700 "GS3(Ortholog in rice:Mao et al., 2010(PubMedID : 31659843)@ Li et al., 2010)"(PubMedID : 32497208)@keratin-associated protein 5-4, putative, expressed -
4 Sobic.006G092300 ZOS4-06 - C2H2 zinc finger protein, expressed -
5 Sobic.005G218000 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed -
6 Sobic.006G089700 LTPL94 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
7 Sobic.007G206000 dihydroflavonol-4-reductase, putative, expressed -
8 Sobic.007G048500 CXXC1 - Cysteine-rich protein with CXXC and CXXXC motifs precursor, putative, expressed -
9 Sobic.005G226500 thaumatin family domain containing protein, expressed -
10 Sobic.010G236000 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -
11 Sobic.007G098600 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.006G006900 expressed protein -
13 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
14 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
15 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
16 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
17 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
18 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
19 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
20 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic004G318800 Sobic004G318800 Sobic007G076100 Sobic007G076100 Sobic004G318800--Sobic007G076100 Sobic006G079500 Sobic006G079500 Sobic004G318800--Sobic006G079500 Sobic001G341700 Sobic001G341700 Sobic004G318800--Sobic001G341700 Sobic006G092300 Sobic006G092300 Sobic004G318800--Sobic006G092300 Sobic005G218000 Sobic005G218000 Sobic004G318800--Sobic005G218000 Sobic006G089700 Sobic006G089700 Sobic004G318800--Sobic006G089700 Sobic007G206000 Sobic007G206000 Sobic004G318800--Sobic007G206000 Sobic007G048500 Sobic007G048500 Sobic004G318800--Sobic007G048500 Sobic005G226500 Sobic005G226500 Sobic004G318800--Sobic005G226500 Sobic007G076100--Sobic004G318800 Sobic007G076100--Sobic005G218000 Sobic007G076100--Sobic001G341700 Sobic007G076100--Sobic006G079500 Sobic003G178500 Sobic003G178500 Sobic007G076100--Sobic003G178500 Sobic007G076100--Sobic006G092300 Sobic002G312200 Sobic002G312200 Sobic007G076100--Sobic002G312200 Sobic007G076100--Sobic006G089700 Sobic002G416400 Sobic002G416400 Sobic007G076100--Sobic002G416400 Sobic006G079500--Sobic005G226500 Sobic006G079500--Sobic007G048500 Sobic003G016000 Sobic003G016000 Sobic006G079500--Sobic003G016000 Sobic006G079500--Sobic007G206000 Sobic003G088200 Sobic003G088200 Sobic006G079500--Sobic003G088200 Sobic007G098600 Sobic007G098600 Sobic006G079500--Sobic007G098600 Sobic006G006900 Sobic006G006900 Sobic006G079500--Sobic006G006900 Sobic002G427550 Sobic002G427550 Sobic006G079500--Sobic002G427550 Sobic001G133200 Sobic001G133200 Sobic006G079500--Sobic001G133200 Sobic001G341700--Sobic007G076100 Sobic001G341700--Sobic004G318800 Sobic001G341700--Sobic005G218000 Sobic001G341700--Sobic006G079500 Sobic001G341700--Sobic006G092300 Sobic001G341700--Sobic006G089700 Sobic001G341700--Sobic002G312200 Sobic002G029700 Sobic002G029700 Sobic001G341700--Sobic002G029700 Sobic001G341700--Sobic003G178500 Sobic006G092300--Sobic006G079500 Sobic001G102600 Sobic001G102600 Sobic006G092300--Sobic001G102600 Sobic010G189366 Sobic010G189366 Sobic006G092300--Sobic010G189366 Sobic010G215700 Sobic010G215700 Sobic006G092300--Sobic010G215700 Sobic006G092300--Sobic007G206000 Sobic004G349150 Sobic004G349150 Sobic006G092300--Sobic004G349150 Sobic006G092300--Sobic005G226500 Sobic001G491400 Sobic001G491400 Sobic006G092300--Sobic001G491400 Sobic005G200700 Sobic005G200700 Sobic006G092300--Sobic005G200700 Sobic005G218000--Sobic007G076100 Sobic005G218000--Sobic001G341700 Sobic005G218000--Sobic002G312200 Sobic005G218000--Sobic006G092300 Sobic005G218000--Sobic004G318800 Sobic005G218000--Sobic006G079500 Sobic005G218000--Sobic001G491400 Sobic001G266100 Sobic001G266100 Sobic005G218000--Sobic001G266100 Sobic010G049600 Sobic010G049600 Sobic005G218000--Sobic010G049600 Sobic006G089700--Sobic007G206000 Sobic010G236000 Sobic010G236000 Sobic006G089700--Sobic010G236000 Sobic006G089700--Sobic006G079500 Sobic004G202800 Sobic004G202800 Sobic006G089700--Sobic004G202800 Sobic003G271700 Sobic003G271700 Sobic006G089700--Sobic003G271700 Sobic002G410600 Sobic002G410600 Sobic006G089700--Sobic002G410600 Sobic006G006800 Sobic006G006800 Sobic006G089700--Sobic006G006800 Sobic006G089700--Sobic004G318800 Sobic003G038700 Sobic003G038700 Sobic006G089700--Sobic003G038700 Sobic007G206000--Sobic003G038700 Sobic007G206000--Sobic005G226500 Sobic007G206000--Sobic002G410600 Sobic007G206000--Sobic010G236000 Sobic008G032400 Sobic008G032400 Sobic007G206000--Sobic008G032400 Sobic007G206000--Sobic006G006900 Sobic007G206000--Sobic007G098600 Sobic007G037400 Sobic007G037400 Sobic007G206000--Sobic007G037400 Sobic007G107500 Sobic007G107500 Sobic007G206000--Sobic007G107500 Sobic007G048500--Sobic005G226500 Sobic007G048500--Sobic007G098600 Sobic007G048500--Sobic001G133200 Sobic005G226500--Sobic007G107500 Sobic005G226500--Sobic007G037400 Sobic005G226500--Sobic006G006900 Sobic002G270400 Sobic002G270400 Sobic005G226500--Sobic002G270400 Sobic002G399600 Sobic002G399600 Sobic005G226500--Sobic002G399600 Sobic005G226500--Sobic007G098600 Sobic005G226500--Sobic001G133200
Octagon: transcription factors


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