Gene annotation
Transcriptome id Sobic.005G087666.1
Synonym -
Functional annotation -
UniProt A0A1Z5RHD7
Pfam PF00481
Panther DB PTHR13832 PTHR13832:SF327
NCBI CDD -
KEGG Orthology K17506; PPM1L, protein phosphatase 1L
Gene Ontology GO:0003824; catalytic activity GO:0006470protein dephosphorylation GO:0004722protein serine/threonine phosphatase activity


Orthologs (automatic annotation)
TAIR AT1G07160 : Protein phosphatase 2C family protein
RAP-DB (Rice) LOC_Os11g13820.1 : protein phosphatase 2C, putative, expressed
MaizeGDB (Corn) Zm00025a015575
Brachypodium KQJ91908
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G362400 uncharacterized 50.6 kDa protein in the 5region of gyrA and gyrB, putative, expressed -
2 Sobic.005G110000 LTPL151 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
3 Sobic.010G044600 GDSL-like lipase/acylhydrolase, putative, expressed -
4 Sobic.010G237100 expressed protein -
5 Sobic.005G199300 expressed protein -
6 Sobic.003G226000 polygalacturonase, putative, expressed K01184: polygalacturonase
7 Sobic.002G370300 pectinesterase, putative, expressed K01051: pectinesterase
8 Sobic.007G001600 LTPL151 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
9 Sobic.002G274900 harpin-induced protein 1 domain containing protein, expressed -
10 Sobic.001G381250 - -
11 Sobic.001G381250 - -
12 Sobic.001G381250 - -
13 Sobic.001G381250 - -
14 Sobic.001G381250 - -
15 Sobic.001G381250 - -
16 Sobic.001G381250 - -
17 Sobic.001G381250 - -
18 Sobic.001G381250 - -
19 Sobic.001G381250 - -
20 Sobic.001G381250 - -


Gene co-expression network
sample Sobic005G087666 Sobic005G087666 Sobic002G362400 Sobic002G362400 Sobic005G087666--Sobic002G362400 Sobic005G110000 Sobic005G110000 Sobic005G087666--Sobic005G110000 Sobic010G044600 Sobic010G044600 Sobic005G087666--Sobic010G044600 Sobic010G237100 Sobic010G237100 Sobic005G087666--Sobic010G237100 Sobic005G199300 Sobic005G199300 Sobic005G087666--Sobic005G199300 Sobic003G226000 Sobic003G226000 Sobic005G087666--Sobic003G226000 Sobic002G370300 Sobic002G370300 Sobic005G087666--Sobic002G370300 Sobic007G001600 Sobic007G001600 Sobic005G087666--Sobic007G001600 Sobic002G274900 Sobic002G274900 Sobic005G087666--Sobic002G274900 Sobic002G362400--Sobic005G110000 Sobic002G362400--Sobic003G226000 Sobic002G362400--Sobic005G199300 Sobic002G362400--Sobic010G044600 Sobic002G362400--Sobic002G274900 Sobic002G362400--Sobic002G370300 Sobic002G362400--Sobic007G001600 Sobic002G362400--Sobic005G087666 Sobic002G362400--Sobic010G237100 Sobic005G110000--Sobic002G362400 Sobic005G110000--Sobic010G044600 Sobic005G110000--Sobic010G237100 Sobic005G110000--Sobic005G087666 Sobic005G110000--Sobic005G199300 Sobic001G381250 Sobic001G381250 Sobic005G110000--Sobic001G381250 Sobic010G044600--Sobic002G362400 Sobic010G044600--Sobic005G110000 Sobic010G044600--Sobic010G237100 Sobic005G169300 Sobic005G169300 Sobic010G044600--Sobic005G169300 Sobic005G192901 Sobic005G192901 Sobic010G044600--Sobic005G192901 Sobic005G192801 Sobic005G192801 Sobic010G044600--Sobic005G192801 Sobic005G193100 Sobic005G193100 Sobic010G044600--Sobic005G193100 Sobic010G044600--Sobic001G381250 Sobic010G237100--Sobic010G044600 Sobic010G237100--Sobic005G110000 Sobic010G237100--Sobic002G362400 Sobic010G237100--Sobic005G087666 Sobic010G237100--Sobic005G169300 Sobic010G237100--Sobic002G370300 Sobic010G237100--Sobic001G381250 Sobic005G199300--Sobic007G001600 Sobic005G199300--Sobic003G226000 Sobic005G199300--Sobic002G274900 Sobic009G010000 Sobic009G010000 Sobic005G199300--Sobic009G010000 Sobic005G199300--Sobic002G370300 Sobic009G010150 Sobic009G010150 Sobic005G199300--Sobic009G010150 Sobic005G199300--Sobic002G362400 Sobic006G154300 Sobic006G154300 Sobic005G199300--Sobic006G154300 Sobic003G392500 Sobic003G392500 Sobic005G199300--Sobic003G392500 Sobic003G226000--Sobic002G274900 Sobic003G226000--Sobic005G199300 Sobic003G226000--Sobic007G001600 Sobic003G226000--Sobic009G010150 Sobic003G226000--Sobic002G362400 Sobic003G226000--Sobic002G370300 Sobic003G226000--Sobic006G154300 Sobic003G226000--Sobic009G010000 Sobic003G101100 Sobic003G101100 Sobic003G226000--Sobic003G101100 Sobic002G370300--Sobic003G226000 Sobic002G370300--Sobic005G199300 Sobic002G370300--Sobic003G101100 Sobic002G370300--Sobic007G001600 Sobic002G370300--Sobic002G274900 Sobic002G370300--Sobic002G362400 Sobic002G370300--Sobic009G010000 Sobic002G370300--Sobic003G392500 Sobic002G370300--Sobic009G010150 Sobic007G001600--Sobic005G199300 Sobic007G001600--Sobic003G226000 Sobic007G001600--Sobic002G274900 Sobic007G001600--Sobic009G010000 Sobic007G001600--Sobic009G010150 Sobic007G001600--Sobic006G154300 Sobic007G001600--Sobic002G370300 Sobic007G001600--Sobic003G392500 Sobic007G001600--Sobic002G362400 Sobic002G274900--Sobic003G226000 Sobic002G274900--Sobic007G001600 Sobic002G274900--Sobic009G010150 Sobic002G274900--Sobic005G199300 Sobic002G274900--Sobic006G154300 Sobic002G274900--Sobic002G362400 Sobic002G274900--Sobic002G370300 Sobic002G274900--Sobic009G010000 Sobic007G036600 Sobic007G036600 Sobic002G274900--Sobic007G036600
Octagon: transcription factors


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