Gene annotation
Transcriptome id Sobic.006G001650.1
Synonym -
Functional annotation -
UniProt A0A1Z5RBB4
Pfam PF00098
Panther DB PTHR23002 PTHR23002:SF63
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0003676nucleic acid binding


Orthologs (automatic annotation)
TAIR AT3G43590 : zinc knuckle (CCHC-type) family protein
RAP-DB (Rice) LOC_Os04g45890.1 : retrotransposon protein, putative, unclassified, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G102900 - -
2 Sobic.009G097000 - -
3 Sobic.006G001700 expressed protein -
4 Sobic.001G269400 - -
5 Sobic.001G269700 - -
6 Sobic.002G414300 - -
7 Sobic.001G094700 expressed protein -
8 Sobic.001G094700 expressed protein -
9 Sobic.001G094700 expressed protein -
10 Sobic.001G094700 expressed protein -
11 Sobic.001G094700 expressed protein -
12 Sobic.001G094700 expressed protein -
13 Sobic.001G094700 expressed protein -
14 Sobic.001G094700 expressed protein -
15 Sobic.001G094700 expressed protein -
16 Sobic.001G094700 expressed protein -
17 Sobic.001G094700 expressed protein -
18 Sobic.001G094700 expressed protein -
19 Sobic.001G094700 expressed protein -
20 Sobic.001G094700 expressed protein -


Gene co-expression network
sample Sobic006G001650 Sobic006G001650 Sobic003G102900 Sobic003G102900 Sobic006G001650--Sobic003G102900 Sobic009G097000 Sobic009G097000 Sobic006G001650--Sobic009G097000 Sobic006G001700 Sobic006G001700 Sobic006G001650--Sobic006G001700 Sobic001G269400 Sobic001G269400 Sobic006G001650--Sobic001G269400 Sobic001G269700 Sobic001G269700 Sobic006G001650--Sobic001G269700 Sobic002G414300 Sobic002G414300 Sobic006G001650--Sobic002G414300 Sobic001G094700 Sobic001G094700 Sobic006G001650--Sobic001G094700 Sobic003G102900--Sobic006G001650 Sobic003G102900--Sobic009G097000 Sobic003G102900--Sobic001G269400 Sobic003G102900--Sobic006G001700 Sobic003G102900--Sobic001G269700 Sobic003G102900--Sobic002G414300 Sobic003G102900--Sobic001G094700 Sobic009G097000--Sobic001G094700 Sobic006G001700--Sobic006G001650 Sobic006G001700--Sobic003G102900 Sobic006G214900 Sobic006G214900 Sobic006G001700--Sobic006G214900 Sobic006G001700--Sobic009G097000 Sobic006G001700--Sobic001G269400 Sobic006G001700--Sobic001G269700 Sobic006G001700--Sobic002G414300 Sobic006G001700--Sobic001G094700 Sobic001G269400--Sobic001G269700 Sobic002G414150 Sobic002G414150 Sobic001G269400--Sobic002G414150 Sobic001G269600 Sobic001G269600 Sobic001G269400--Sobic001G269600 Sobic001G269400--Sobic002G414300 Sobic005G009500 Sobic005G009500 Sobic001G269400--Sobic005G009500 Sobic001G269400--Sobic009G097000 Sobic005G006300 Sobic005G006300 Sobic001G269400--Sobic005G006300 Sobic001G269400--Sobic001G094700 Sobic001G269700--Sobic001G269600 Sobic001G269700--Sobic002G414300 Sobic001G269700--Sobic001G269400 Sobic001G269700--Sobic002G414150 Sobic007G167000 Sobic007G167000 Sobic001G269700--Sobic007G167000 Sobic001G269700--Sobic009G097000 Sobic010G107800 Sobic010G107800 Sobic001G269700--Sobic010G107800 Sobic001G269700--Sobic001G094700 Sobic002G414300--Sobic001G269700 Sobic002G414300--Sobic001G269600 Sobic002G414300--Sobic001G269400 Sobic002G414300--Sobic010G107800 Sobic002G414300--Sobic007G167000 Sobic002G414300--Sobic009G097000 Sobic007G129800 Sobic007G129800 Sobic002G414300--Sobic007G129800 Sobic002G414300--Sobic001G094700 Sobic001G094700--Sobic001G094700
Octagon: transcription factors


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