Gene annotation
Transcriptome id Sobic.006G006800.1
Synonym Sb06g000760
Functional annotation expressed protein
UniProt C5YBN0
Pfam PF00161
Panther DB PTHR33453 PTHR33453:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0017148; negative regulation of translation


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g48220.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G001700 POEI25 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
2 Sobic.004G202800 glycosyl hydrolase family 5 protein, putative, expressed -
3 Sobic.002G270400 LTPL45 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
4 Sobic.006G006900 expressed protein -
5 Sobic.007G098600 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
7 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
8 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
9 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
10 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
11 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
12 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
13 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
14 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
15 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
16 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
17 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
18 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
19 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
20 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic006G006800 Sobic006G006800 Sobic004G001700 Sobic004G001700 Sobic006G006800--Sobic004G001700 Sobic004G202800 Sobic004G202800 Sobic006G006800--Sobic004G202800 Sobic002G270400 Sobic002G270400 Sobic006G006800--Sobic002G270400 Sobic006G006900 Sobic006G006900 Sobic006G006800--Sobic006G006900 Sobic007G098600 Sobic007G098600 Sobic006G006800--Sobic007G098600 Sobic001G133200 Sobic001G133200 Sobic006G006800--Sobic001G133200 Sobic010G187400 Sobic010G187400 Sobic004G001700--Sobic010G187400 Sobic004G001700--Sobic006G006900 Sobic004G001700--Sobic002G270400 Sobic008G032400 Sobic008G032400 Sobic004G001700--Sobic008G032400 Sobic004G001700--Sobic007G098600 Sobic002G427550 Sobic002G427550 Sobic004G001700--Sobic002G427550 Sobic004G001700--Sobic001G133200 Sobic004G202800--Sobic006G006800 Sobic010G236000 Sobic010G236000 Sobic004G202800--Sobic010G236000 Sobic004G202800--Sobic008G032400 Sobic004G202800--Sobic006G006900 Sobic003G088200 Sobic003G088200 Sobic004G202800--Sobic003G088200 Sobic004G202800--Sobic010G187400 Sobic003G263800 Sobic003G263800 Sobic004G202800--Sobic003G263800 Sobic004G202800--Sobic001G133200 Sobic007G037400 Sobic007G037400 Sobic002G270400--Sobic007G037400 Sobic007G107500 Sobic007G107500 Sobic002G270400--Sobic007G107500 Sobic002G270400--Sobic006G006900 Sobic002G270400--Sobic007G098600 Sobic002G270400--Sobic001G133200 Sobic006G006900--Sobic007G098600 Sobic006G006900--Sobic001G133200 Sobic007G098600--Sobic001G133200 Sobic001G133200--Sobic001G133200
Octagon: transcription factors


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