Gene annotation
| Transcriptome id | Sobic.006G014800.1 |
|---|---|
| Synonym | P-glycoprotein, ABCB19, MDR1, ATMDR11, MDR11, ATABCB19, Sb06g001440, SbPGP15, PGP19, ATPGP19, ATMDR1 |
| Functional annotation | "domain confirmed by Pfam database, expressed in leaf, flower, stem and root, expression induced by IAA, BR and ABA treatments" (PubMedID : 20528920) ABC transporter, ATP-binding protein, putative, expressed |
| UniProt | A0A1B6PJF4 |
| Pfam | PF09818 PF00005 PF00664 |
| Panther DB | PTHR24221 PTHR24221:SF265 |
| NCBI CDD | - |
| KEGG Orthology | K05658; ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1 |
| Gene Ontology | GO:0016887; ATPase activity GO:0005524ATP binding GO:0016021integral component of membrane GO:0006810transport |
Orthologs (automatic annotation)
| TAIR | AT3G28860 : ATP binding cassette subfamily B19 |
|---|---|
| RAP-DB (Rice) | LOC_Os03g08380.1 : ABC transporter, ATP-binding protein, putative, expressed |
| MaizeGDB (Corn) | Zm00025a012286 , Zm00025a056200 |
| Brachypodium | KQK00850 , KQK00851 , PNT78029 , KQJ94695 |
| Barley | HORVU4Hr1G077060.2 , HORVU4Hr1G077060.3 , HORVU4Hr1G077060.1 , HORVU4Hr1G077060.4 , HORVU4Hr1G077060.5 |
| Wheat | TraesCS4B02G298100 , TraesCS5A02G495900 , TraesCS4D02G296900 , TraesCS4D02G296900 , TraesCS4A02G006900 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.005G134700 | chalcone and stilbene synthases, putative, expressed | - |
| 2 | Sobic.002G405700 | expressed protein | - |
| 3 | Sobic.001G122600 | expressed protein | - |
| 4 | Sobic.001G122600 | expressed protein | - |
| 5 | Sobic.001G122600 | expressed protein | - |
| 6 | Sobic.001G122600 | expressed protein | - |
| 7 | Sobic.001G122600 | expressed protein | - |
| 8 | Sobic.001G122600 | expressed protein | - |
| 9 | Sobic.001G122600 | expressed protein | - |
| 10 | Sobic.001G122600 | expressed protein | - |
| 11 | Sobic.001G122600 | expressed protein | - |
| 12 | Sobic.001G122600 | expressed protein | - |
| 13 | Sobic.001G122600 | expressed protein | - |
| 14 | Sobic.001G122600 | expressed protein | - |
| 15 | Sobic.001G122600 | expressed protein | - |
| 16 | Sobic.001G122600 | expressed protein | - |
| 17 | Sobic.001G122600 | expressed protein | - |
| 18 | Sobic.001G122600 | expressed protein | - |
| 19 | Sobic.001G122600 | expressed protein | - |
| 20 | Sobic.001G122600 | expressed protein | - |
Gene co-expression network
Octagon: transcription factors
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