Gene annotation
Transcriptome id Sobic.006G244900.1
Synonym Sb06g031070
Functional annotation expressed protein
UniProt C5Y9G2
Pfam PF03647
Panther DB PTHR12668 PTHR12668:SF5
NCBI CDD KOG4267; Predicted membrane protein
KEGG Orthology -
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT3G43520 : Transmembrane proteins 14C
RAP-DB (Rice) LOC_Os04g55930.1 : expressed protein
MaizeGDB (Corn) Zm00025a009494
Brachypodium KQJ85023
Barley -
Wheat TraesCS2A02G506400 , TraesCS2D02G507100 , TraesCS2B02G534700
Populus -


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cDNA sequences
Sobic.006G244900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G007550 - -
2 Sobic.004G217400 expressed protein -
3 Sobic.003G329100 DUF617 domain containing protein, expressed -
4 Sobic.001G018700 RD26, putative, expressed -
5 Sobic.001G018700 RD26, putative, expressed -
6 Sobic.001G018700 RD26, putative, expressed -
7 Sobic.001G018700 RD26, putative, expressed -
8 Sobic.001G018700 RD26, putative, expressed -
9 Sobic.001G018700 RD26, putative, expressed -
10 Sobic.001G018700 RD26, putative, expressed -
11 Sobic.001G018700 RD26, putative, expressed -
12 Sobic.001G018700 RD26, putative, expressed -
13 Sobic.001G018700 RD26, putative, expressed -
14 Sobic.001G018700 RD26, putative, expressed -
15 Sobic.001G018700 RD26, putative, expressed -
16 Sobic.001G018700 RD26, putative, expressed -
17 Sobic.001G018700 RD26, putative, expressed -
18 Sobic.001G018700 RD26, putative, expressed -
19 Sobic.001G018700 RD26, putative, expressed -
20 Sobic.001G018700 RD26, putative, expressed -


Gene co-expression network
sample Sobic006G244900 Sobic006G244900 Sobic004G007550 Sobic004G007550 Sobic006G244900--Sobic004G007550 Sobic004G217400 Sobic004G217400 Sobic006G244900--Sobic004G217400 Sobic003G329100 Sobic003G329100 Sobic006G244900--Sobic003G329100 Sobic001G018700 Sobic001G018700 Sobic006G244900--Sobic001G018700 Sobic004G007550--Sobic006G244900 Sobic004G007550--Sobic004G217400 Sobic004G007550--Sobic003G329100 Sobic007G151900 Sobic007G151900 Sobic004G007550--Sobic007G151900 Sobic004G337132 Sobic004G337132 Sobic004G007550--Sobic004G337132 Sobic004G007550--Sobic001G018700 Sobic004G217400--Sobic006G244900 Sobic004G217400--Sobic004G007550 Sobic004G217400--Sobic004G337132 Sobic004G217400--Sobic007G151900 Sobic004G217400--Sobic003G329100 Sobic004G300400 Sobic004G300400 Sobic004G217400--Sobic004G300400 Sobic003G072100 Sobic003G072100 Sobic004G217400--Sobic003G072100 Sobic004G217400--Sobic001G018700 Sobic003G329100--Sobic004G007550 Sobic003G329100--Sobic006G244900 Sobic003G329100--Sobic001G018700 Sobic001G018700--Sobic001G018700
Octagon: transcription factors


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