Gene annotation
Transcriptome id Sobic.007G121800.2
Synonym SUVH6, Sb07g019863, SDG23
Functional annotation histone-lysine N-methyltransferase, putative, expressed
UniProt A0A1Z5RA02
Pfam PF05033 PF00856 PF02182
Panther DB PTHR22884 PTHR22884:SF370
NCBI CDD KOG1082; Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing
KEGG Orthology K11420; [histone H3]-lysine9 N-trimethyltransferase EHMT
Gene Ontology GO:0018024; histone-lysine N-methyltransferase activity GO:0008270zinc ion binding GO:0005634nucleus GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT2G22740 : SU(VAR)3-9 homolog 6
RAP-DB (Rice) LOC_Os09g19830.1 : histone-lysine N-methyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a013810 , Zm00025a024884
Brachypodium PNT64431 , KQJ89920
Barley HORVU5Hr1G057440.7 , HORVU5Hr1G057440.6 , HORVU5Hr1G057440.5 , HORVU5Hr1G057440.3 , HORVU5Hr1G057440.2 , HORVU5Hr1G057440.1 , HORVU5Hr1G057440.8
Wheat TraesCS5A02G194500 , TraesCS5A02G194500 , TraesCS5D02G197700 , TraesCS5B02G190000 , TraesCS5D02G197700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G080075 - -
2 Sobic.003G254400 expressed protein -
3 Sobic.001G100650 - -
4 Sobic.010G064050 - -
5 Sobic.003G008400 acetyltransferase, GNAT family protein, expressed -
6 Sobic.002G082350 - -
7 Sobic.009G073200 expressed protein -
8 Sobic.003G318600 - -
9 Sobic.008G191800 B3 DNA binding domain containing protein, expressed -
10 Sobic.003G360500 glycosyl transferase, putative, expressed K00750: GYG1, glycogenin
11 Sobic.001G413400 matrix attachment region binding protein, putative, expressed -
12 Sobic.002G313850 - -
13 Sobic.007G145300 zinc knuckle family protein, expressed -
14 Sobic.009G197350 - -
15 Sobic.009G156700 protein transport protein, putative, expressed -
16 Sobic.001G101650 - -
17 Sobic.009G190100 expressed protein -
18 Sobic.005G057500 Leucine Rich Repeat family protein, expressed -
19 Sobic.010G123000 - -
20 Sobic.003G244401 - -


Gene co-expression network
sample Sobic007G121800 Sobic007G121800 Sobic005G080075 Sobic005G080075 Sobic007G121800--Sobic005G080075 Sobic003G254400 Sobic003G254400 Sobic007G121800--Sobic003G254400 Sobic001G100650 Sobic001G100650 Sobic007G121800--Sobic001G100650 Sobic010G064050 Sobic010G064050 Sobic007G121800--Sobic010G064050 Sobic003G008400 Sobic003G008400 Sobic007G121800--Sobic003G008400 Sobic002G082350 Sobic002G082350 Sobic007G121800--Sobic002G082350 Sobic009G073200 Sobic009G073200 Sobic007G121800--Sobic009G073200 Sobic003G318600 Sobic003G318600 Sobic007G121800--Sobic003G318600 Sobic008G191800 Sobic008G191800 Sobic007G121800--Sobic008G191800 Sobic005G080075--Sobic001G100650 Sobic005G080075--Sobic010G064050 Sobic005G080075--Sobic003G008400 Sobic005G080075--Sobic002G082350 Sobic005G080075--Sobic003G254400 Sobic005G080075--Sobic009G073200 Sobic005G080075--Sobic003G318600 Sobic003G360500 Sobic003G360500 Sobic005G080075--Sobic003G360500 Sobic001G413400 Sobic001G413400 Sobic005G080075--Sobic001G413400 Sobic003G254400--Sobic003G008400 Sobic003G254400--Sobic005G080075 Sobic003G254400--Sobic001G100650 Sobic003G254400--Sobic010G064050 Sobic003G254400--Sobic003G318600 Sobic003G254400--Sobic002G082350 Sobic003G254400--Sobic003G360500 Sobic003G254400--Sobic009G073200 Sobic003G254400--Sobic001G413400 Sobic001G100650--Sobic001G100650 Sobic001G100650--Sobic005G080075 Sobic001G100650--Sobic002G082350 Sobic001G100650--Sobic003G008400 Sobic001G100650--Sobic003G254400 Sobic001G100650--Sobic009G073200 Sobic001G100650--Sobic003G318600 Sobic001G100650--Sobic003G360500 Sobic002G313850 Sobic002G313850 Sobic001G100650--Sobic002G313850 Sobic010G064050--Sobic001G100650 Sobic010G064050--Sobic005G080075 Sobic010G064050--Sobic002G082350 Sobic010G064050--Sobic003G008400 Sobic010G064050--Sobic003G254400 Sobic010G064050--Sobic009G073200 Sobic010G064050--Sobic003G318600 Sobic010G064050--Sobic003G360500 Sobic010G064050--Sobic002G313850 Sobic003G008400--Sobic005G080075 Sobic003G008400--Sobic003G254400 Sobic003G008400--Sobic001G100650 Sobic003G008400--Sobic010G064050 Sobic003G008400--Sobic003G318600 Sobic003G008400--Sobic002G082350 Sobic003G008400--Sobic003G360500 Sobic003G008400--Sobic009G073200 Sobic003G008400--Sobic001G413400 Sobic002G082350--Sobic010G064050 Sobic002G082350--Sobic001G100650 Sobic002G082350--Sobic005G080075 Sobic002G082350--Sobic003G008400 Sobic002G082350--Sobic009G073200 Sobic002G082350--Sobic003G254400 Sobic002G082350--Sobic008G191800 Sobic002G082350--Sobic002G313850 Sobic007G145300 Sobic007G145300 Sobic002G082350--Sobic007G145300 Sobic009G073200--Sobic010G064050 Sobic009G073200--Sobic001G100650 Sobic009G073200--Sobic005G080075 Sobic009G073200--Sobic002G082350 Sobic009G073200--Sobic003G008400 Sobic009G073200--Sobic003G254400 Sobic009G073200--Sobic003G318600 Sobic009G073200--Sobic003G360500 Sobic009G073200--Sobic002G313850 Sobic003G318600--Sobic003G008400 Sobic003G318600--Sobic003G254400 Sobic003G318600--Sobic005G080075 Sobic003G318600--Sobic001G100650 Sobic003G318600--Sobic010G064050 Sobic003G318600--Sobic002G082350 Sobic003G318600--Sobic003G360500 Sobic003G318600--Sobic009G073200 Sobic003G318600--Sobic001G413400 Sobic008G191800--Sobic002G082350 Sobic008G191800--Sobic010G064050 Sobic008G191800--Sobic001G100650 Sobic008G191800--Sobic005G080075 Sobic008G191800--Sobic003G008400 Sobic008G191800--Sobic009G073200 Sobic008G191800--Sobic003G360500 Sobic008G191800--Sobic003G254400 Sobic008G191800--Sobic003G318600
Octagon: transcription factors


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