Gene annotation
Transcriptome id Sobic.008G031800.1
Synonym Sb08g002737
Functional annotation zinc finger, C3HC4 type domain containing protein, expressed
UniProt C5YRL5
Pfam PF13639
Panther DB PTHR14155 PTHR14155:SF102
NCBI CDD KOG1493; Anaphase-promoting complex (APC), subunit 11
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT2G27940 : RING/U-box superfamily protein
RAP-DB (Rice) LOC_Os06g09310.1 : zinc finger, C3HC4 type domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G185700 expressed protein -
2 Sobic.010G123750 - -
3 Sobic.004G236901 - -
4 Sobic.001G328850 - -
5 Sobic.005G071000 NBS-LRR disease resistance protein, putative, expressed -
6 Sobic.009G220400 glyoxal oxidase-related, putative, expressed -
7 Sobic.001G056000 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
8 Sobic.009G062150 - -
9 Sobic.006G204850 - -
10 Sobic.004G246950 - -
11 Sobic.008G153801 - -
12 Sobic.001G018700 RD26, putative, expressed -
13 Sobic.001G018700 RD26, putative, expressed -
14 Sobic.001G018700 RD26, putative, expressed -
15 Sobic.001G018700 RD26, putative, expressed -
16 Sobic.001G018700 RD26, putative, expressed -
17 Sobic.001G018700 RD26, putative, expressed -
18 Sobic.001G018700 RD26, putative, expressed -
19 Sobic.001G018700 RD26, putative, expressed -
20 Sobic.001G018700 RD26, putative, expressed -


Gene co-expression network
sample Sobic008G031800 Sobic008G031800 Sobic001G185700 Sobic001G185700 Sobic008G031800--Sobic001G185700 Sobic010G123750 Sobic010G123750 Sobic008G031800--Sobic010G123750 Sobic004G236901 Sobic004G236901 Sobic008G031800--Sobic004G236901 Sobic001G328850 Sobic001G328850 Sobic008G031800--Sobic001G328850 Sobic005G071000 Sobic005G071000 Sobic008G031800--Sobic005G071000 Sobic009G220400 Sobic009G220400 Sobic008G031800--Sobic009G220400 Sobic001G056000 Sobic001G056000 Sobic008G031800--Sobic001G056000 Sobic009G062150 Sobic009G062150 Sobic008G031800--Sobic009G062150 Sobic006G204850 Sobic006G204850 Sobic008G031800--Sobic006G204850 Sobic003G066200 Sobic003G066200 Sobic001G185700--Sobic003G066200 Sobic001G185700--Sobic001G328850 Sobic001G018700 Sobic001G018700 Sobic001G185700--Sobic001G018700 Sobic010G123750--Sobic009G220400 Sobic010G123750--Sobic004G236901 Sobic010G123750--Sobic005G071000 Sobic010G123750--Sobic001G056000 Sobic007G069900 Sobic007G069900 Sobic010G123750--Sobic007G069900 Sobic004G075301 Sobic004G075301 Sobic010G123750--Sobic004G075301 Sobic003G242500 Sobic003G242500 Sobic010G123750--Sobic003G242500 Sobic010G123750--Sobic001G018700 Sobic004G236901--Sobic009G220400 Sobic004G236901--Sobic005G071000 Sobic004G236901--Sobic001G056000 Sobic004G236901--Sobic010G123750 Sobic004G236901--Sobic007G069900 SobicK044420 SobicK044420 Sobic004G236901--SobicK044420 Sobic004G236901--Sobic001G018700 Sobic005G120466 Sobic005G120466 Sobic001G328850--Sobic005G120466 Sobic001G328850--Sobic001G185700 Sobic004G171350 Sobic004G171350 Sobic001G328850--Sobic004G171350 Sobic009G219601 Sobic009G219601 Sobic001G328850--Sobic009G219601 Sobic004G123801 Sobic004G123801 Sobic001G328850--Sobic004G123801 Sobic001G328850--Sobic006G204850 Sobic007G181801 Sobic007G181801 Sobic001G328850--Sobic007G181801 Sobic003G384650 Sobic003G384650 Sobic001G328850--Sobic003G384650 Sobic003G178101 Sobic003G178101 Sobic001G328850--Sobic003G178101 Sobic005G071000--Sobic009G220400 Sobic005G071000--Sobic001G056000 Sobic005G071000--Sobic004G236901 Sobic005G071000--Sobic010G123750 Sobic005G071000--SobicK044420 Sobic005G071000--Sobic007G069900 Sobic001G258500 Sobic001G258500 Sobic005G071000--Sobic001G258500 Sobic005G071000--Sobic003G384650 Sobic007G084900 Sobic007G084900 Sobic005G071000--Sobic007G084900 Sobic009G220400--Sobic005G071000 Sobic009G220400--Sobic001G056000 Sobic009G220400--Sobic004G236901 Sobic009G220400--Sobic010G123750 Sobic009G220400--SobicK044420 Sobic009G220400--Sobic007G069900 Sobic009G220400--Sobic001G258500 Sobic009G220400--Sobic008G031800 Sobic009G220400--Sobic007G084900 Sobic001G056000--Sobic009G220400 Sobic001G056000--Sobic005G071000 Sobic001G056000--Sobic004G236901 Sobic001G056000--Sobic010G123750 Sobic001G056000--SobicK044420 Sobic001G056000--Sobic007G069900 Sobic001G056000--Sobic001G258500 Sobic001G056000--Sobic007G084900 Sobic001G056000--Sobic008G031800 Sobic008G153801 Sobic008G153801 Sobic009G062150--Sobic008G153801 Sobic009G062150--Sobic006G204850 Sobic003G426750 Sobic003G426750 Sobic009G062150--Sobic003G426750 Sobic009G067700 Sobic009G067700 Sobic009G062150--Sobic009G067700 Sobic005G017632 Sobic005G017632 Sobic009G062150--Sobic005G017632 Sobic009G062150--Sobic001G018700 Sobic006G204850--Sobic008G153801 Sobic006G204850--Sobic005G017632 Sobic006G204850--Sobic001G018700
Octagon: transcription factors


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