Gene annotation
| Transcriptome id | Sobic.008G038900.2 |
|---|---|
| Synonym | |
| Functional annotation | eukaryotic aspartyl protease domain containing protein, expressed |
| UniProt | C5YS33 |
| Pfam | PF14541 PF14543 |
| Panther DB | PTHR13683 PTHR13683:SF267 |
| NCBI CDD | KOG1339; Aspartyl protease |
| KEGG Orthology | - |
| Gene Ontology | GO:0006508; proteolysis GO:0004190aspartic-type endopeptidase activity |
Orthologs (automatic annotation)
| TAIR | AT5G10770 : Eukaryotic aspartyl protease family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os12g05750.1 : eukaryotic aspartyl protease domain containing protein, expressed |
| MaizeGDB (Corn) | - |
| Brachypodium | - |
| Barley | - |
| Wheat | - |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.003G016000 | LTPL18 - Protease inhibitor/seed storage/LTP family protein precursor, expressed | - |
| 2 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 3 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 4 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 5 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 6 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 7 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 8 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 9 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 10 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 11 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 12 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 13 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 14 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 15 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 16 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 17 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 18 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 19 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 20 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
Gene co-expression network
Octagon: transcription factors
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