Gene annotation
| Transcriptome id | Sobic.008G154000.2 |
|---|---|
| Synonym | Sb08g020300, PIL5, PIF1 |
| Functional annotation | helix-loop-helix DNA-binding domain containing protein, expressed |
| UniProt | A0A1Z5R7F3 |
| Pfam | PF00010 |
| Panther DB | PTHR12565 PTHR12565:SF134 |
| NCBI CDD | KOG4304; Transcriptional repressors of the hairy/E(spl) family (contains HLH) |
| KEGG Orthology | - |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT2G20180 : phytochrome interacting factor 3-like 5 |
|---|---|
| RAP-DB (Rice) | LOC_Os12g40590.1 : helix-loop-helix DNA-binding domain containing protein, expressed |
| MaizeGDB (Corn) | Zm00025a004582 , Zm00025a004583 |
| Brachypodium | KQJ85972 |
| Barley | - |
| Wheat | - |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 2 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 3 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 4 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 5 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 6 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 7 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 8 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 9 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 10 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 11 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 12 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 13 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 14 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 15 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 16 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 17 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 18 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 19 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 20 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
Gene co-expression network
Octagon: transcription factors
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