Gene annotation
| Transcriptome id | Sobic.009G116000.2 |
|---|---|
| Synonym | AL1 |
| Functional annotation | PHD finger protein, putative, expressed |
| UniProt | A0A1Z5R268 |
| Pfam | PF00628 PF12165 |
| Panther DB | PTHR12321 PTHR12321:SF39 |
| NCBI CDD | KOG1632; Uncharacterized PHD Zn-finger protein |
| KEGG Orthology | - |
| Gene Ontology | GO:0005515; protein binding GO:0006355regulation of transcription, DNA-templated |
Orthologs (automatic annotation)
| TAIR | AT5G20510 : alfin-like 5 |
|---|---|
| RAP-DB (Rice) | LOC_Os03g60390.1 : PHD finger protein, putative, expressed |
| MaizeGDB (Corn) | - |
| Brachypodium | - |
| Barley | - |
| Wheat | - |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
 |
Find similar expressed genes
 |
| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.002G133150 | - | - |
| 2 | Sobic.007G083200 | expressed protein | - |
| 3 | Sobic.005G071200 | - | - |
| 4 | Sobic.001G220132 | - | - |
| 5 | Sobic.001G220132 | - | - |
| 6 | Sobic.001G220132 | - | - |
| 7 | Sobic.001G220132 | - | - |
| 8 | Sobic.001G220132 | - | - |
| 9 | Sobic.001G220132 | - | - |
| 10 | Sobic.001G220132 | - | - |
| 11 | Sobic.001G220132 | - | - |
| 12 | Sobic.009G169050 | - | - |
| 13 | Sobic.009G196600 | expressed protein | - |
| 14 | Sobic.010G136100 | "kafirin seed storage protein, delta-kafirin precursor"(PubMedID : 21853065)@- | - |
| 15 | Sobic.001G027000 | expressed protein | - |
| 16 | Sobic.004G076900 | - | - |
| 17 | Sobic.003G211266 | - | - |
| 18 | Sobic.008G181250 | - | - |
| 19 | Sobic.005G189800 | - | - |
| 20 | Sobic.009G019700 | - | - |
Gene co-expression network
Octagon: transcription factors
© 2015- RIKEN, All rights reserved.
