Gene annotation
Transcriptome id Sobic.010G049800.1
Synonym Sb10g004310
Functional annotation strictosidine synthase, putative, expressed
UniProt A0A1W0VRH6
Pfam PF03088
Panther DB PTHR10426 PTHR10426:SF34
NCBI CDD KOG1520; Predicted alkaloid synthase/Surface mucin Hemomucin
KEGG Orthology -
Gene Ontology GO:0016844; strictosidine synthase activity GO:0009058biosynthetic process


Orthologs (automatic annotation)
TAIR AT3G57030 : Calcium-dependent phosphotriesterase superfamily protein
RAP-DB (Rice) LOC_Os08g07810.1 : strictosidine synthase, putative, expressed
MaizeGDB (Corn) Zm00025a039537 , Zm00025a002403 , Zm00025a002402 , Zm00025a002400 , Zm00025a039540 , Zm00025a002406 , Zm00025a002405
Brachypodium -
Barley -
Wheat TraesCS5B02G383000
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G064400 desiccation-related protein PCC13-62 precursor, putative, expressed -
2 Sobic.001G381250 - -
3 Sobic.001G381250 - -
4 Sobic.001G381250 - -
5 Sobic.001G381250 - -
6 Sobic.001G381250 - -
7 Sobic.001G381250 - -
8 Sobic.001G381250 - -
9 Sobic.001G381250 - -
10 Sobic.001G381250 - -
11 Sobic.001G381250 - -
12 Sobic.001G381250 - -
13 Sobic.001G381250 - -
14 Sobic.001G381250 - -
15 Sobic.001G381250 - -
16 Sobic.001G381250 - -
17 Sobic.001G381250 - -
18 Sobic.005G169300 WIP5 - Wound-induced protein precursor, expressed -
19 Sobic.005G193100 "alpha-kafirin locus, highly digestible high-lysine (hdhl) mutant P721Q"(PubMedID : 23948869)@- -
20 Sobic.005G192900 "alpha-kafirin locus, highly digestible high-lysine (hdhl) mutant P721Q"(PubMedID : 23948869)@- -


Gene co-expression network
sample Sobic010G049800 Sobic010G049800 Sobic006G064400 Sobic006G064400 Sobic010G049800--Sobic006G064400 Sobic001G381250 Sobic001G381250 Sobic010G049800--Sobic001G381250 Sobic010G044600 Sobic010G044600 Sobic006G064400--Sobic010G044600 Sobic010G237100 Sobic010G237100 Sobic006G064400--Sobic010G237100 Sobic005G110000 Sobic005G110000 Sobic006G064400--Sobic005G110000 Sobic002G362400 Sobic002G362400 Sobic006G064400--Sobic002G362400 Sobic005G169300 Sobic005G169300 Sobic006G064400--Sobic005G169300 Sobic005G192901 Sobic005G192901 Sobic006G064400--Sobic005G192901 Sobic005G192801 Sobic005G192801 Sobic006G064400--Sobic005G192801 Sobic005G192900 Sobic005G192900 Sobic006G064400--Sobic005G192900 Sobic005G192700 Sobic005G192700 Sobic006G064400--Sobic005G192700 Sobic001G381250--Sobic001G381250
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.