Gene annotation
Transcriptome id Sobic.010G062700.1
Synonym
Functional annotation LTPL29 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
UniProt A0A194YHM3
Pfam PF14368
Panther DB PTHR33286 PTHR33286:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G56480 : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RAP-DB (Rice) LOC_Os01g58660.1 : LTPL29 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G398150 - -
2 Sobic.010G142132 - -
3 Sobic.006G176300 OsSub44 - Putative Subtilisin homologue, expressed -
4 Sobic.005G067000 OsWAK91 - OsWAK receptor-like protein kinase, expressed -
5 Sobic.006G134600 thaumatin, putative, expressed -
6 Sobic.007G221300 RNA recognition motif containing protein, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
7 Sobic.005G207900 zinc knuckle family protein, expressed -
8 Sobic.009G128901 - -
9 Sobic.005G193900 DNA binding protein, putative, expressed -
10 Sobic.002G064450 - -
11 Sobic.001G018700 RD26, putative, expressed -
12 Sobic.001G018700 RD26, putative, expressed -
13 Sobic.001G018700 RD26, putative, expressed -
14 Sobic.001G018700 RD26, putative, expressed -
15 Sobic.001G018700 RD26, putative, expressed -
16 Sobic.001G018700 RD26, putative, expressed -
17 Sobic.001G018700 RD26, putative, expressed -
18 Sobic.001G018700 RD26, putative, expressed -
19 Sobic.001G018700 RD26, putative, expressed -
20 Sobic.001G018700 RD26, putative, expressed -


Gene co-expression network
sample Sobic010G062700 Sobic010G062700 Sobic001G398150 Sobic001G398150 Sobic010G062700--Sobic001G398150 Sobic010G142132 Sobic010G142132 Sobic010G062700--Sobic010G142132 Sobic006G176300 Sobic006G176300 Sobic010G062700--Sobic006G176300 Sobic005G067000 Sobic005G067000 Sobic010G062700--Sobic005G067000 Sobic006G134600 Sobic006G134600 Sobic010G062700--Sobic006G134600 Sobic007G221300 Sobic007G221300 Sobic010G062700--Sobic007G221300 Sobic005G207900 Sobic005G207900 Sobic010G062700--Sobic005G207900 Sobic009G128901 Sobic009G128901 Sobic010G062700--Sobic009G128901 Sobic005G193900 Sobic005G193900 Sobic010G062700--Sobic005G193900 Sobic001G398150--Sobic006G134600 Sobic001G398150--Sobic010G062700 Sobic006G200100 Sobic006G200100 Sobic001G398150--Sobic006G200100 Sobic005G089800 Sobic005G089800 Sobic001G398150--Sobic005G089800 Sobic001G398150--Sobic010G142132 Sobic001G398150--Sobic005G067000 Sobic010G115450 Sobic010G115450 Sobic001G398150--Sobic010G115450 Sobic001G398150--Sobic006G176300 Sobic001G398150--Sobic007G221300 Sobic010G142132--Sobic007G221300 Sobic010G142132--Sobic006G176300 Sobic009G067700 Sobic009G067700 Sobic010G142132--Sobic009G067700 Sobic001G018700 Sobic001G018700 Sobic010G142132--Sobic001G018700 Sobic006G176300--Sobic007G221300 Sobic006G176300--Sobic001G018700 Sobic001G371500 Sobic001G371500 Sobic005G067000--Sobic001G371500 Sobic005G067000--Sobic007G221300 Sobic005G067000--Sobic010G142132 Sobic005G067000--Sobic006G176300 Sobic007G078400 Sobic007G078400 Sobic005G067000--Sobic007G078400 Sobic010G158300 Sobic010G158300 Sobic005G067000--Sobic010G158300 Sobic002G218350 Sobic002G218350 Sobic005G067000--Sobic002G218350 Sobic007G054300 Sobic007G054300 Sobic005G067000--Sobic007G054300 Sobic005G067000--Sobic001G018700 Sobic006G134600--Sobic001G398150 Sobic006G134600--Sobic006G200100 Sobic006G134600--Sobic005G089800 Sobic004G102500 Sobic004G102500 Sobic006G134600--Sobic004G102500 Sobic006G134600--Sobic010G062700 Sobic006G134600--Sobic010G115450 Sobic006G134600--Sobic010G142132 Sobic006G134600--Sobic005G067000 Sobic007G176400 Sobic007G176400 Sobic006G134600--Sobic007G176400 Sobic007G221300--Sobic001G018700 Sobic003G090100 Sobic003G090100 Sobic005G207900--Sobic003G090100 Sobic005G207900--Sobic001G018700 Sobic009G128901--Sobic010G142132 Sobic009G128901--Sobic007G221300 Sobic009G128901--Sobic006G176300 Sobic003G434500 Sobic003G434500 Sobic009G128901--Sobic003G434500 Sobic001G273600 Sobic001G273600 Sobic009G128901--Sobic001G273600 Sobic009G128901--Sobic001G018700 Sobic005G193900--Sobic001G018700
Octagon: transcription factors


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