Gene annotation
Transcriptome id Sobic.010G152900.1
Synonym XYL4, ATBXL4, Sb10g020500
Functional annotation beta-D-xylosidase, putative, expressed
UniProt C5Z3M0
Pfam PF14310 PF00933 PF01915
Panther DB PTHR30620 PTHR30620:SF41
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G64570 : beta-D-xylosidase 4
RAP-DB (Rice) LOC_Os11g47350.1 : beta-D-xylosidase, putative, expressed
MaizeGDB (Corn) Zm00025a055973 , Zm00025a022120 , Zm00025a029154 , Zm00025a036035 , Zm00025a051569
Brachypodium KQJ84878 , KQK04062 , PNT64333
Barley HORVU2Hr1G115640.7 , HORVU2Hr1G115640.5 , HORVU2Hr1G115640.4 , HORVU2Hr1G115640.2 , HORVU2Hr1G115640.9 , HORVU2Hr1G115640.17 , HORVU2Hr1G115640.16 , HORVU2Hr1G115640.15 , HORVU2Hr1G115640.14 , HORVU2Hr1G115640.13 , HORVU2Hr1G115640.12 , HORVU2Hr1G115640.11 , HORVU6Hr1G062820.2 , HORVU6Hr1G062820.3 , HORVU6Hr1G062820.1 , HORVU6Hr1G062820.6 , HORVU6Hr1G062820.7 , HORVU6Hr1G062820.4 , HORVU6Hr1G062820.5 , HORVU4Hr1G028510.2 , HORVU4Hr1G028510.3 , HORVU4Hr1G028510.1
Wheat TraesCS4A02G173100 , TraesCS4A02G173100 , TraesCS6D02G226100 , TraesCS2B02G553100 , TraesCS4B02G143900 , TraesCS4B02G143900 , TraesCS6B02G280400 , TraesCS6A02G243900 , TraesCS4D02G142500 , TraesCS4D02G142500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G239400 wax synthase isoform 3, putative, expressed -
2 Sobic.003G206300 THION27 - Plant thionin family protein precursor, expressed -
3 Sobic.010G200000 triacylglycerol lipase precursor, putative, expressed K01052: lysosomal acid lipase/cholesteryl ester hydrolase
4 Sobic.009G116300 OsSub46 - Putative Subtilisin homologue, expressed -
5 Sobic.001G332050 - -
6 Sobic.001G332050 - -
7 Sobic.001G332050 - -
8 Sobic.001G332050 - -
9 Sobic.001G332050 - -
10 Sobic.001G332050 - -
11 Sobic.001G332050 - -
12 Sobic.001G332050 - -
13 Sobic.001G332050 - -
14 Sobic.001G332050 - -
15 Sobic.001G332050 - -
16 Sobic.001G332050 - -
17 Sobic.001G332050 - -
18 Sobic.001G332050 - -
19 Sobic.001G332050 - -
20 Sobic.001G332050 - -


Gene co-expression network
sample Sobic010G152900 Sobic010G152900 Sobic003G239400 Sobic003G239400 Sobic010G152900--Sobic003G239400 Sobic003G206300 Sobic003G206300 Sobic010G152900--Sobic003G206300 Sobic010G200000 Sobic010G200000 Sobic010G152900--Sobic010G200000 Sobic009G116300 Sobic009G116300 Sobic010G152900--Sobic009G116300 Sobic001G332050 Sobic001G332050 Sobic010G152900--Sobic001G332050 Sobic003G239400--Sobic009G116300 Sobic003G239400--Sobic010G200000 Sobic003G206000 Sobic003G206000 Sobic003G239400--Sobic003G206000 Sobic003G239400--Sobic001G332050 Sobic003G206300--Sobic009G116300 Sobic003G206300--Sobic010G200000 Sobic003G206300--Sobic001G332050 Sobic010G200000--Sobic009G116300 Sobic010G200000--Sobic001G332050 Sobic009G116300--Sobic010G200000 Sobic009G116300--Sobic001G332050 Sobic001G332050--Sobic001G332050
Octagon: transcription factors


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