Gene annotation
| Transcriptome id | Sobic.010G158300.2 |
|---|---|
| Synonym | Sb10g021070 |
| Functional annotation | zinc finger, C3HC4 type domain containing protein, expressed |
| UniProt | A0A1W0VTD4 |
| Pfam | PF13639 |
| Panther DB | PTHR14155 PTHR14155:SF146 |
| NCBI CDD | KOG4172; Predicted E3 ubiquitin ligase |
| KEGG Orthology | - |
| Gene Ontology | GO:0008270; zinc ion binding GO:0005515protein binding |
Orthologs (automatic annotation)
| TAIR | AT4G40070 : RING/U-box superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os01g11490.1 : zinc finger, C3HC4 type domain containing protein, expressed |
| MaizeGDB (Corn) | - |
| Brachypodium | - |
| Barley | - |
| Wheat | - |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.002G218350 | - | - |
| 2 | Sobic.007G078400 | transketolase, chloroplast precursor, putative, expressed | - |
| 3 | Sobic.006G089200 | expressed protein | - |
| 4 | Sobic.001G018700 | RD26, putative, expressed | - |
| 5 | Sobic.001G018700 | RD26, putative, expressed | - |
| 6 | Sobic.001G018700 | RD26, putative, expressed | - |
| 7 | Sobic.001G018700 | RD26, putative, expressed | - |
| 8 | Sobic.001G018700 | RD26, putative, expressed | - |
| 9 | Sobic.001G018700 | RD26, putative, expressed | - |
| 10 | Sobic.001G018700 | RD26, putative, expressed | - |
| 11 | Sobic.001G018700 | RD26, putative, expressed | - |
| 12 | Sobic.001G018700 | RD26, putative, expressed | - |
| 13 | Sobic.001G018700 | RD26, putative, expressed | - |
| 14 | Sobic.001G018700 | RD26, putative, expressed | - |
| 15 | Sobic.001G018700 | RD26, putative, expressed | - |
| 16 | Sobic.001G018700 | RD26, putative, expressed | - |
| 17 | Sobic.001G018700 | RD26, putative, expressed | - |
| 18 | Sobic.001G018700 | RD26, putative, expressed | - |
| 19 | Sobic.001G018700 | RD26, putative, expressed | - |
| 20 | Sobic.001G018700 | RD26, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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