Gene annotation
| Transcriptome id | Sobic.010G259400.1 |
|---|---|
| Synonym | LBD2, lateral organ boundaries, Sb10g029595, SbLBD36 |
| Functional annotation | "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA and BR treatments" (PubMedID : 20499123) DUF260 domain containing protein, putative, expressed |
| UniProt | A0A194YLK3 |
| Pfam | PF03195 |
| Panther DB | PTHR31301 PTHR31301:SF19 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT1G06280 : LOB domain-containing protein 2 |
|---|---|
| RAP-DB (Rice) | LOC_Os01g14030.1 : DUF260 domain containing protein, putative, expressed |
| MaizeGDB (Corn) | Zm00025a041749 |
| Brachypodium | KQK03543 |
| Barley | HORVU3Hr1G033360.1 |
| Wheat | TraesCS3B02G196100 , TraesCS3A02G170500 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.009G075000 | expressed protein | - |
| 2 | Sobic.003G088200 | dihydroflavonol-4-reductase, putative, expressed | - |
| 3 | Sobic.003G263800 | LTPL150 - Protease inhibitor/seed storage/LTP family protein precursor, expressed | - |
| 4 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 5 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 6 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 7 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 8 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 9 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 10 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 11 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 12 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 13 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 14 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 15 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 16 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 17 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 18 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 19 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
| 20 | Sobic.001G133200 | OsFBX85 - F-box domain containing protein, expressed | - |
Gene co-expression network
Octagon: transcription factors
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