Hb_000230_040

Information

Type -
Description -
Location Contig230: 58854-59836
Sequence    

Annotation

kegg
ID vvi:100264068
description protein MON2 homolog
nr
ID XP_010659951.1
description PREDICTED: protein MON2 homolog isoform X2 [Vitis vinifera]
swissprot
ID -
description -
trembl
ID F6HTV1
description Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0030g01530 PE=4 SV=1
Gene Ontology
ID GO:0015031
description protein mon2 homolog isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_23984: 59768-63523
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000230_040 0.0 - - PREDICTED: protein MON2 homolog isoform X2 [Vitis vinifera]
2 Hb_003061_010 0.1503601674 - - hypothetical protein SORBIDRAFT_01g039870 [Sorghum bicolor]
3 Hb_002151_080 0.1557787769 - - hypothetical protein MIMGU_mgv1a000572mg [Erythranthe guttata]
4 Hb_000088_020 0.197047092 transcription factor TF Family: M-type hypothetical protein JCGZ_10946 [Jatropha curcas]
5 Hb_002253_040 0.2027263001 - - PREDICTED: BTB/POZ domain-containing protein At2g13690 [Jatropha curcas]
6 Hb_000785_080 0.2063291106 - - PREDICTED: zinc finger CCCH domain-containing protein 13 [Jatropha curcas]
7 Hb_170487_010 0.2067252594 - - -
8 Hb_000521_020 0.2081916116 - - PREDICTED: uncharacterized protein LOC105650319 [Jatropha curcas]
9 Hb_001218_050 0.2100617373 - - Ribosome-binding protein, putative [Ricinus communis]
10 Hb_063716_080 0.2102592215 - - DNA-directed RNA polymerase III subunit F, putative [Ricinus communis]
11 Hb_012180_050 0.2111233999 - - PREDICTED: uncharacterized protein LOC105632355 isoform X3 [Jatropha curcas]
12 Hb_004109_060 0.2123275264 - - hypothetical protein POPTR_0019s12520g [Populus trichocarpa]
13 Hb_012114_060 0.2132186789 - - PREDICTED: uncharacterized protein LOC105645814 [Jatropha curcas]
14 Hb_000866_030 0.214049558 - - hypothetical protein RCOM_1615820 [Ricinus communis]
15 Hb_003641_060 0.2142037192 - - PREDICTED: uncharacterized protein LOC105638019 [Jatropha curcas]
16 Hb_000742_210 0.2153902659 - - protein phosphatase 2c, putative [Ricinus communis]
17 Hb_013691_020 0.2158071389 - - transcription initiation factor iie, alpha subunit, putative [Ricinus communis]
18 Hb_001832_160 0.2163199473 - - conserved hypothetical protein [Ricinus communis]
19 Hb_002960_160 0.2163580128 - - PREDICTED: vacuolar protein sorting-associated protein 35B isoform X2 [Jatropha curcas]
20 Hb_010642_030 0.2166132742 - - zinc phosphodiesterase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000230_040 Hb_000230_040 Hb_003061_010 Hb_003061_010 Hb_000230_040--Hb_003061_010 Hb_002151_080 Hb_002151_080 Hb_000230_040--Hb_002151_080 Hb_000088_020 Hb_000088_020 Hb_000230_040--Hb_000088_020 Hb_002253_040 Hb_002253_040 Hb_000230_040--Hb_002253_040 Hb_000785_080 Hb_000785_080 Hb_000230_040--Hb_000785_080 Hb_170487_010 Hb_170487_010 Hb_000230_040--Hb_170487_010 Hb_126112_010 Hb_126112_010 Hb_003061_010--Hb_126112_010 Hb_000891_040 Hb_000891_040 Hb_003061_010--Hb_000891_040 Hb_156526_010 Hb_156526_010 Hb_003061_010--Hb_156526_010 Hb_003061_010--Hb_002151_080 Hb_005839_050 Hb_005839_050 Hb_003061_010--Hb_005839_050 Hb_000032_060 Hb_000032_060 Hb_002151_080--Hb_000032_060 Hb_002151_080--Hb_000088_020 Hb_000523_090 Hb_000523_090 Hb_002151_080--Hb_000523_090 Hb_000181_180 Hb_000181_180 Hb_002151_080--Hb_000181_180 Hb_006913_040 Hb_006913_040 Hb_000088_020--Hb_006913_040 Hb_000333_100 Hb_000333_100 Hb_000088_020--Hb_000333_100 Hb_002942_160 Hb_002942_160 Hb_000088_020--Hb_002942_160 Hb_000866_030 Hb_000866_030 Hb_000088_020--Hb_000866_030 Hb_031862_180 Hb_031862_180 Hb_000088_020--Hb_031862_180 Hb_007643_050 Hb_007643_050 Hb_000088_020--Hb_007643_050 Hb_004109_060 Hb_004109_060 Hb_002253_040--Hb_004109_060 Hb_001818_080 Hb_001818_080 Hb_002253_040--Hb_001818_080 Hb_001158_220 Hb_001158_220 Hb_002253_040--Hb_001158_220 Hb_031091_010 Hb_031091_010 Hb_002253_040--Hb_031091_010 Hb_002253_040--Hb_007643_050 Hb_000116_110 Hb_000116_110 Hb_002253_040--Hb_000116_110 Hb_003641_060 Hb_003641_060 Hb_000785_080--Hb_003641_060 Hb_004934_070 Hb_004934_070 Hb_000785_080--Hb_004934_070 Hb_000083_160 Hb_000083_160 Hb_000785_080--Hb_000083_160 Hb_003010_020 Hb_003010_020 Hb_000785_080--Hb_003010_020 Hb_000038_080 Hb_000038_080 Hb_000785_080--Hb_000038_080 Hb_004881_020 Hb_004881_020 Hb_000785_080--Hb_004881_020 Hb_001052_040 Hb_001052_040 Hb_170487_010--Hb_001052_040 Hb_015354_010 Hb_015354_010 Hb_170487_010--Hb_015354_010 Hb_099046_010 Hb_099046_010 Hb_170487_010--Hb_099046_010 Hb_000886_060 Hb_000886_060 Hb_170487_010--Hb_000886_060 Hb_173178_020 Hb_173178_020 Hb_170487_010--Hb_173178_020 Hb_000152_670 Hb_000152_670 Hb_170487_010--Hb_000152_670
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.40417 0.902378 0.188381 0.438564 0.432641 1.87521
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.51646 0.811744 0 0.538956 0.339609

CAGE analysis