Hb_002742_090

Information

Type -
Description -
Location Contig2742: 209095-222171
Sequence    

Annotation

kegg
ID vvi:100259893
description putative glucose-6-phosphate 1-epimerase
nr
ID XP_012075140.1
description PREDICTED: putative glucose-6-phosphate 1-epimerase [Jatropha curcas]
swissprot
ID Q40784
description Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1
trembl
ID A0A067KSZ7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10389 PE=4 SV=1
Gene Ontology
ID GO:0016853
description glucose-6-phosphate 1-epimerase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_28722: 209100-222087 , PASA_asmbl_28723: 219313-219754
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002742_090 0.0 - - PREDICTED: putative glucose-6-phosphate 1-epimerase [Jatropha curcas]
2 Hb_000817_030 0.0671827134 - - mak, putative [Ricinus communis]
3 Hb_001776_160 0.0734962204 - - 20S proteasome alpha subunit G1 [Theobroma cacao]
4 Hb_000120_020 0.0744348827 - - PREDICTED: inositol 3-kinase [Jatropha curcas]
5 Hb_028515_010 0.0779878338 - - PREDICTED: protein DEFECTIVE IN MERISTEM SILENCING 3 isoform X1 [Jatropha curcas]
6 Hb_002110_200 0.0800106603 - - PREDICTED: chaperone protein dnaJ 1, mitochondrial isoform X1 [Jatropha curcas]
7 Hb_068056_030 0.0818083355 - - ATP synthase epsilon chain, mitochondrial, putative [Ricinus communis]
8 Hb_027625_010 0.082373392 - - PREDICTED: protein sym-1-like [Jatropha curcas]
9 Hb_001085_120 0.0833271341 - - PREDICTED: UV radiation resistance-associated gene protein isoform X1 [Jatropha curcas]
10 Hb_000224_140 0.0839148322 - - ribonuclease z, chloroplast, putative [Ricinus communis]
11 Hb_000254_050 0.0891222506 - - hypothetical protein VITISV_010510 [Vitis vinifera]
12 Hb_006569_100 0.0897516474 - - hypothetical protein POPTR_0005s26990g [Populus trichocarpa]
13 Hb_000108_190 0.0908218548 - - PREDICTED: dihydroorotate dehydrogenase (quinone), mitochondrial [Jatropha curcas]
14 Hb_001512_080 0.0916647055 - - PREDICTED: proteasome subunit beta type-7-B [Jatropha curcas]
15 Hb_011512_040 0.0931805776 - - PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Jatropha curcas]
16 Hb_000086_280 0.0935746243 - - PREDICTED: vacuolar protein sorting-associated protein 2 homolog 3-like [Gossypium raimondii]
17 Hb_005568_120 0.094147027 - - Prephenate dehydratase [Hevea brasiliensis]
18 Hb_017948_010 0.0961335636 - - mitochondrial thioredoxin 2 [Hevea brasiliensis]
19 Hb_027654_050 0.0968899767 - - PREDICTED: uncharacterized protein LOC105646592 [Jatropha curcas]
20 Hb_000398_040 0.0969714734 - - Auxin response factor, putative [Ricinus communis]

Gene co-expression network

sample Hb_002742_090 Hb_002742_090 Hb_000817_030 Hb_000817_030 Hb_002742_090--Hb_000817_030 Hb_001776_160 Hb_001776_160 Hb_002742_090--Hb_001776_160 Hb_000120_020 Hb_000120_020 Hb_002742_090--Hb_000120_020 Hb_028515_010 Hb_028515_010 Hb_002742_090--Hb_028515_010 Hb_002110_200 Hb_002110_200 Hb_002742_090--Hb_002110_200 Hb_068056_030 Hb_068056_030 Hb_002742_090--Hb_068056_030 Hb_027625_010 Hb_027625_010 Hb_000817_030--Hb_027625_010 Hb_005463_140 Hb_005463_140 Hb_000817_030--Hb_005463_140 Hb_005883_100 Hb_005883_100 Hb_000817_030--Hb_005883_100 Hb_001519_030 Hb_001519_030 Hb_000817_030--Hb_001519_030 Hb_017948_010 Hb_017948_010 Hb_000817_030--Hb_017948_010 Hb_006831_120 Hb_006831_120 Hb_001776_160--Hb_006831_120 Hb_027654_050 Hb_027654_050 Hb_001776_160--Hb_027654_050 Hb_001085_120 Hb_001085_120 Hb_001776_160--Hb_001085_120 Hb_001776_160--Hb_002110_200 Hb_001512_080 Hb_001512_080 Hb_001776_160--Hb_001512_080 Hb_011381_080 Hb_011381_080 Hb_000120_020--Hb_011381_080 Hb_000016_160 Hb_000016_160 Hb_000120_020--Hb_000016_160 Hb_000120_020--Hb_028515_010 Hb_000108_190 Hb_000108_190 Hb_000120_020--Hb_000108_190 Hb_000254_050 Hb_000254_050 Hb_000120_020--Hb_000254_050 Hb_005568_120 Hb_005568_120 Hb_028515_010--Hb_005568_120 Hb_004837_160 Hb_004837_160 Hb_028515_010--Hb_004837_160 Hb_000373_130 Hb_000373_130 Hb_028515_010--Hb_000373_130 Hb_003349_090 Hb_003349_090 Hb_028515_010--Hb_003349_090 Hb_114310_080 Hb_114310_080 Hb_028515_010--Hb_114310_080 Hb_000985_060 Hb_000985_060 Hb_028515_010--Hb_000985_060 Hb_002110_200--Hb_000254_050 Hb_002110_200--Hb_001512_080 Hb_000789_230 Hb_000789_230 Hb_002110_200--Hb_000789_230 Hb_002110_200--Hb_027654_050 Hb_000453_120 Hb_000453_120 Hb_002110_200--Hb_000453_120 Hb_000224_140 Hb_000224_140 Hb_068056_030--Hb_000224_140 Hb_002918_290 Hb_002918_290 Hb_068056_030--Hb_002918_290 Hb_006569_100 Hb_006569_100 Hb_068056_030--Hb_006569_100 Hb_068056_030--Hb_001512_080 Hb_068056_030--Hb_005463_140 Hb_000417_260 Hb_000417_260 Hb_068056_030--Hb_000417_260
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
30.9601 14.1026 21.7522 43.2747 27.5958 27.6867
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
63.0033 113.874 101.163 35.547 39.4766

CAGE analysis