Gene annotation
Transcriptome id Sobic.001G166401.1
Synonym -
Functional annotation -
UniProt A0A1Z5S601
Pfam PF14226 PF03171
Panther DB PTHR10209 PTHR10209:SF98
NCBI CDD KOG0143; Iron/ascorbate family oxidoreductases
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT3G19000 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RAP-DB (Rice) LOC_Os03g42130.1 : gibberellin 20 oxidase 2, putative, expressed
MaizeGDB (Corn) Zm00025a017303
Brachypodium KQK19942 , KQK14161 , KQK14160
Barley HORVU4Hr1G013840.2 , HORVU4Hr1G013840.3 , HORVU4Hr1G013840.1 , HORVU4Hr1G013840.4 , HORVU4Hr1G013840.5
Wheat TraesCS4D02G079900 , TraesCS4B02G081200 , TraesCS4A02G234100
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G042400 expressed protein -
2 Sobic.005G110445 - -
3 Sobic.005G087666 - K17506: PPM1L, protein phosphatase 1L
4 Sobic.002G274900 harpin-induced protein 1 domain containing protein, expressed -
5 Sobic.005G199300 expressed protein -
6 Sobic.002G362400 uncharacterized 50.6 kDa protein in the 5region of gyrA and gyrB, putative, expressed -
7 Sobic.007G036600 expressed protein -
8 Sobic.009G010150 - -
9 Sobic.003G226000 polygalacturonase, putative, expressed K01184: polygalacturonase
10 Sobic.007G001600 LTPL151 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.006G154300 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@KUN1 - Kunitz-type trypsin inhibitor precursor, expressed -
12 Sobic.005G110000 LTPL151 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.009G010000 expressed protein -
14 Sobic.010G044600 GDSL-like lipase/acylhydrolase, putative, expressed -
15 Sobic.003G392500 cytochrome P450, putative, expressed -
16 Sobic.005G185600 - -
17 Sobic.007G029800 LTPL24 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.002G370300 pectinesterase, putative, expressed K01051: pectinesterase
19 Sobic.003G101100 no apical meristem protein, putative, expressed -
20 Sobic.010G095300 - -


Gene co-expression network
sample Sobic001G166401 Sobic001G166401 Sobic004G042400 Sobic004G042400 Sobic001G166401--Sobic004G042400 Sobic005G110445 Sobic005G110445 Sobic001G166401--Sobic005G110445 Sobic005G087666 Sobic005G087666 Sobic001G166401--Sobic005G087666 Sobic002G274900 Sobic002G274900 Sobic001G166401--Sobic002G274900 Sobic005G199300 Sobic005G199300 Sobic001G166401--Sobic005G199300 Sobic002G362400 Sobic002G362400 Sobic001G166401--Sobic002G362400 Sobic007G036600 Sobic007G036600 Sobic001G166401--Sobic007G036600 Sobic009G010150 Sobic009G010150 Sobic001G166401--Sobic009G010150 Sobic003G226000 Sobic003G226000 Sobic001G166401--Sobic003G226000 Sobic010G095300 Sobic010G095300 Sobic004G042400--Sobic010G095300 Sobic007G156300 Sobic007G156300 Sobic004G042400--Sobic007G156300 Sobic005G112066 Sobic005G112066 Sobic004G042400--Sobic005G112066 Sobic006G031600 Sobic006G031600 Sobic004G042400--Sobic006G031600 Sobic001G326000 Sobic001G326000 Sobic004G042400--Sobic001G326000 Sobic002G077500 Sobic002G077500 Sobic004G042400--Sobic002G077500 Sobic007G049400 Sobic007G049400 Sobic004G042400--Sobic007G049400 Sobic002G091800 Sobic002G091800 Sobic004G042400--Sobic002G091800 Sobic002G344900 Sobic002G344900 Sobic004G042400--Sobic002G344900 Sobic003G213300 Sobic003G213300 Sobic005G110445--Sobic003G213300 Sobic005G169300 Sobic005G169300 Sobic005G110445--Sobic005G169300 Sobic001G381250 Sobic001G381250 Sobic005G110445--Sobic001G381250 Sobic005G087666--Sobic002G362400 Sobic005G110000 Sobic005G110000 Sobic005G087666--Sobic005G110000 Sobic010G044600 Sobic010G044600 Sobic005G087666--Sobic010G044600 Sobic010G237100 Sobic010G237100 Sobic005G087666--Sobic010G237100 Sobic005G087666--Sobic005G199300 Sobic005G087666--Sobic003G226000 Sobic002G370300 Sobic002G370300 Sobic005G087666--Sobic002G370300 Sobic007G001600 Sobic007G001600 Sobic005G087666--Sobic007G001600 Sobic005G087666--Sobic002G274900 Sobic002G274900--Sobic003G226000 Sobic002G274900--Sobic007G001600 Sobic002G274900--Sobic009G010150 Sobic002G274900--Sobic005G199300 Sobic006G154300 Sobic006G154300 Sobic002G274900--Sobic006G154300 Sobic002G274900--Sobic002G362400 Sobic002G274900--Sobic002G370300 Sobic009G010000 Sobic009G010000 Sobic002G274900--Sobic009G010000 Sobic002G274900--Sobic007G036600 Sobic005G199300--Sobic007G001600 Sobic005G199300--Sobic003G226000 Sobic005G199300--Sobic002G274900 Sobic005G199300--Sobic009G010000 Sobic005G199300--Sobic002G370300 Sobic005G199300--Sobic009G010150 Sobic005G199300--Sobic002G362400 Sobic005G199300--Sobic006G154300 Sobic003G392500 Sobic003G392500 Sobic005G199300--Sobic003G392500 Sobic002G362400--Sobic005G110000 Sobic002G362400--Sobic003G226000 Sobic002G362400--Sobic005G199300 Sobic002G362400--Sobic010G044600 Sobic002G362400--Sobic002G274900 Sobic002G362400--Sobic002G370300 Sobic002G362400--Sobic007G001600 Sobic002G362400--Sobic005G087666 Sobic002G362400--Sobic010G237100 Sobic007G036600--Sobic002G274900 Sobic007G036600--Sobic003G226000 Sobic007G036600--Sobic002G362400 Sobic007G036600--Sobic009G010150 Sobic007G036600--Sobic006G154300 Sobic007G036600--Sobic005G199300 Sobic007G036600--Sobic007G001600 Sobic007G036600--Sobic002G370300 Sobic007G036600--Sobic010G044600 Sobic009G010150--Sobic006G154300 Sobic009G010150--Sobic002G274900 Sobic009G010150--Sobic007G001600 Sobic009G010150--Sobic003G226000 Sobic009G010150--Sobic005G199300 Sobic009G010150--Sobic009G010000 Sobic004G313800 Sobic004G313800 Sobic009G010150--Sobic004G313800 Sobic009G010150--Sobic007G036600 Sobic003G438700 Sobic003G438700 Sobic009G010150--Sobic003G438700 Sobic003G226000--Sobic002G274900 Sobic003G226000--Sobic005G199300 Sobic003G226000--Sobic007G001600 Sobic003G226000--Sobic009G010150 Sobic003G226000--Sobic002G362400 Sobic003G226000--Sobic002G370300 Sobic003G226000--Sobic006G154300 Sobic003G226000--Sobic009G010000 Sobic003G101100 Sobic003G101100 Sobic003G226000--Sobic003G101100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.