Gene annotation
Transcriptome id Sobic.001G218300.1
Synonym
Functional annotation MATH domain containing protein, expressed
UniProt A0A1Z5S728
Pfam PF00917
Panther DB -
NCBI CDD KOG1987; Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G17380 : TRAF-like family protein
RAP-DB (Rice) LOC_Os10g33830.1 : MATH domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G062300 anthranilate phosphoribosyltransferase, putative, expressed -
2 Sobic.001G211101 - -
3 Sobic.007G023650 - -
4 Sobic.003G178101 - K09490: HSPA5, endoplasmic reticulum chaperone BiP
5 Sobic.006G075650 - -
6 Sobic.005G193900 DNA binding protein, putative, expressed -
7 Sobic.002G069700 expressed protein -
8 Sobic.009G110300 protein phosphotase protein, putative, expressed -
9 Sobic.009G196500 expressed protein -
10 Sobic.003G384650 - -
11 Sobic.003G358500 - -
12 Sobic.002G099500 expressed protein -
13 Sobic.001G018700 RD26, putative, expressed -
14 Sobic.001G018700 RD26, putative, expressed -
15 Sobic.001G018700 RD26, putative, expressed -
16 Sobic.001G018700 RD26, putative, expressed -
17 Sobic.001G018700 RD26, putative, expressed -
18 Sobic.001G018700 RD26, putative, expressed -
19 Sobic.001G018700 RD26, putative, expressed -
20 Sobic.001G018700 RD26, putative, expressed -


Gene co-expression network
sample Sobic001G218300 Sobic001G218300 Sobic005G062300 Sobic005G062300 Sobic001G218300--Sobic005G062300 Sobic001G211101 Sobic001G211101 Sobic001G218300--Sobic001G211101 Sobic007G023650 Sobic007G023650 Sobic001G218300--Sobic007G023650 Sobic003G178101 Sobic003G178101 Sobic001G218300--Sobic003G178101 Sobic006G075650 Sobic006G075650 Sobic001G218300--Sobic006G075650 Sobic005G193900 Sobic005G193900 Sobic001G218300--Sobic005G193900 Sobic002G069700 Sobic002G069700 Sobic001G218300--Sobic002G069700 Sobic009G110300 Sobic009G110300 Sobic001G218300--Sobic009G110300 Sobic009G196500 Sobic009G196500 Sobic001G218300--Sobic009G196500 Sobic005G062300--Sobic006G075650 Sobic005G062300--Sobic001G211101 Sobic005G062300--Sobic001G218300 Sobic005G062300--Sobic003G178101 Sobic005G120466 Sobic005G120466 Sobic005G062300--Sobic005G120466 Sobic002G099500 Sobic002G099500 Sobic005G062300--Sobic002G099500 Sobic003G384650 Sobic003G384650 Sobic005G062300--Sobic003G384650 Sobic006G218050 Sobic006G218050 Sobic005G062300--Sobic006G218050 Sobic005G077666 Sobic005G077666 Sobic005G062300--Sobic005G077666 Sobic001G211101--Sobic003G178101 Sobic001G018700 Sobic001G018700 Sobic001G211101--Sobic001G018700 Sobic007G023650--Sobic005G193900 Sobic010G140300 Sobic010G140300 Sobic007G023650--Sobic010G140300 Sobic008G082450 Sobic008G082450 Sobic007G023650--Sobic008G082450 Sobic001G040900 Sobic001G040900 Sobic007G023650--Sobic001G040900 Sobic010G090550 Sobic010G090550 Sobic007G023650--Sobic010G090550 Sobic007G023650--Sobic001G018700 Sobic003G178101--Sobic003G384650 Sobic001G030800 Sobic001G030800 Sobic003G178101--Sobic001G030800 Sobic003G178101--Sobic001G018700 Sobic003G405400 Sobic003G405400 Sobic006G075650--Sobic003G405400 Sobic006G075650--Sobic001G211101 Sobic001G539100 Sobic001G539100 Sobic006G075650--Sobic001G539100 Sobic006G075650--Sobic003G178101 Sobic009G019301 Sobic009G019301 Sobic006G075650--Sobic009G019301 Sobic006G075650--Sobic005G062300 Sobic006G075650--Sobic003G384650 Sobic006G075650--Sobic002G099500 Sobic002G218350 Sobic002G218350 Sobic006G075650--Sobic002G218350 Sobic005G193900--Sobic001G018700 Sobic010G101350 Sobic010G101350 Sobic002G069700--Sobic010G101350 Sobic002G069700--Sobic009G110300 Sobic003G358500 Sobic003G358500 Sobic002G069700--Sobic003G358500 Sobic002G069700--Sobic001G218300 Sobic002G069700--Sobic007G023650 Sobic002G069700--Sobic009G196500 Sobic004G177050 Sobic004G177050 Sobic002G069700--Sobic004G177050 Sobic010G197632 Sobic010G197632 Sobic002G069700--Sobic010G197632 Sobic002G069700--Sobic005G193900 Sobic009G110300--Sobic002G069700 Sobic009G110300--Sobic007G023650 Sobic001G236950 Sobic001G236950 Sobic009G110300--Sobic001G236950 Sobic009G110300--Sobic003G358500 Sobic009G110300--Sobic005G193900 Sobic009G110300--Sobic009G196500 Sobic009G110300--Sobic001G218300 Sobic009G110300--Sobic001G018700 Sobic002G034900 Sobic002G034900 Sobic009G196500--Sobic002G034900 Sobic009G196500--Sobic005G193900 Sobic009G196500--Sobic001G018700
Octagon: transcription factors


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