Gene annotation
Transcriptome id Sobic.001G231500.1,Sobic.001G231500.2
Synonym Sb01g020290
Functional annotation ubiquitin family protein, putative, expressed
UniProt C5WZI5 , A0A1Z5S7I3
Pfam PF00240 PF00240 PF13855
Panther DB PTHR23155 PTHR23155 PTHR23155:SF610
NCBI CDD KOG0617; Ras suppressor protein (contains leucine-rich repeats) KOG4579Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G30105 : -
RAP-DB (Rice) LOC_Os10g31790.1 : ubiquitin family protein, putative, expressed
MaizeGDB (Corn) Zm00025a006736
Brachypodium KQJ96937 , KQJ96944
Barley HORVU1Hr1G037810.10 , HORVU1Hr1G037810.11 , HORVU1Hr1G037810.12 , HORVU1Hr1G037810.13 , HORVU1Hr1G037810.14 , HORVU1Hr1G037810.16 , HORVU1Hr1G037810.15 , HORVU1Hr1G037810.8 , HORVU1Hr1G037810.9 , HORVU1Hr1G037810.2 , HORVU1Hr1G037810.3 , HORVU1Hr1G037810.1 , HORVU1Hr1G037810.6 , HORVU1Hr1G037810.7 , HORVU1Hr1G037810.4 , HORVU1Hr1G037810.5
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.001G231500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G033900 - -
2 Sobic.002G079300 Protein isoflavone-7-O-methytransferase 9 (Os)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
3 Sobic.006G061500 ulp1 protease family protein, putative, expressed -
4 Sobic.003G344501 - -
5 Sobic.004G230000 expressed protein -
6 Sobic.004G230000 expressed protein -
7 Sobic.004G230000 expressed protein -
8 Sobic.004G230000 expressed protein -
9 Sobic.004G230000 expressed protein -
10 Sobic.004G230000 expressed protein -
11 Sobic.004G230000 expressed protein -
12 Sobic.004G230000 expressed protein -
13 Sobic.002G125400 - -
14 Sobic.005G081200 DEFL33 - Defensin and Defensin-like DEFL family, expressed -
15 Sobic.003G069300 transferase family protein, putative, expressed -
16 Sobic.004G129201 - -
17 Sobic.006G113950 - -
18 Sobic.002G027401 - -
19 Sobic.001G507550 - -
20 Sobic.004G221200 - -


Gene co-expression network
sample Sobic001G231500 Sobic001G231500 Sobic010G033900 Sobic010G033900 Sobic001G231500--Sobic010G033900 Sobic002G079300 Sobic002G079300 Sobic001G231500--Sobic002G079300 Sobic006G061500 Sobic006G061500 Sobic001G231500--Sobic006G061500 Sobic003G344501 Sobic003G344501 Sobic001G231500--Sobic003G344501 Sobic004G230000 Sobic004G230000 Sobic001G231500--Sobic004G230000 Sobic010G033900--Sobic003G344501 Sobic010G033900--Sobic004G230000 Sobic002G079300--Sobic004G230000 Sobic002G079300--Sobic003G344501 Sobic006G061500--Sobic004G230000 Sobic006G061500--Sobic003G344501 Sobic003G344501--Sobic004G230000 Sobic003G344501--Sobic006G061500 Sobic004G230000--Sobic004G230000 Sobic004G230000--Sobic003G344501 Sobic004G230000--Sobic006G061500
Octagon: transcription factors


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