Gene annotation
Transcriptome id Sobic.001G297900.1
Synonym ATBIOF, Sb01g029060, BIOF
Functional annotation aminotransferase, classes I and II, domain containing protein, expressed
UniProt A0A1Z5S8I2
Pfam PF00155
Panther DB PTHR13693 PTHR13693:SF53
NCBI CDD KOG1359; Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase
KEGG Orthology K00652; 8-amino-7-oxononanoate synthase
Gene Ontology GO:0009058; biosynthetic process


Orthologs (automatic annotation)
TAIR AT5G04620 : biotin F
RAP-DB (Rice) LOC_Os01g53450.1 : aminotransferase, classes I and II, domain containing protein, expressed
MaizeGDB (Corn) Zm00025a057487
Brachypodium KQJ97802 , KQJ97803 , KQJ97801
Barley HORVU1Hr1G056070.19 , HORVU1Hr1G056070.18 , HORVU1Hr1G056070.11 , HORVU1Hr1G056070.10 , HORVU1Hr1G056070.13 , HORVU1Hr1G056070.12 , HORVU1Hr1G056070.15 , HORVU1Hr1G056070.14 , HORVU1Hr1G056070.17 , HORVU1Hr1G056070.16 , HORVU1Hr1G056070.9 , HORVU1Hr1G056070.8 , HORVU1Hr1G056070.5 , HORVU1Hr1G056070.4 , HORVU1Hr1G056070.7 , HORVU1Hr1G056070.6 , HORVU1Hr1G056070.1 , HORVU1Hr1G056070.3 , HORVU1Hr1G056070.2 , HORVU1Hr1G056070.24 , HORVU1Hr1G056070.25 , HORVU1Hr1G056070.26 , HORVU1Hr1G056070.20 , HORVU1Hr1G056070.21 , HORVU1Hr1G056070.22 , HORVU1Hr1G056070.23
Wheat TraesCS3B02G312200 , TraesCS1B02G233100 , TraesCS1B02G233100 , TraesCS1D02G221300 , TraesCS1A02G219800 , TraesCS3A02G278000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G055000 bZIP transcription factor domain containing protein, expressed -
2 Sobic.010G011500 - -
3 Sobic.001G480900 glyoxalase family protein, putative, expressed -
4 Sobic.008G030801 - -
5 Sobic.006G049633 - -
6 Sobic.004G296750 - -
7 Sobic.002G266700 - -
8 Sobic.003G229900 - -
9 Sobic.003G281000 - -
10 Sobic.008G061900 - -
11 Sobic.007G007100 expressed protein -
12 Sobic.010G215201 - -
13 Sobic.001G071500 - -
14 Sobic.003G089500 seven in absentia protein family protein, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1
15 Sobic.002G172300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.002G240200 expressed protein K19307: 25S rRNA (uracil2634-N3)-methyltransferase
17 Sobic.006G161200 cysteine-rich repeat secretory protein precursor, putative, expressed -
18 Sobic.010G143666 - -
19 Sobic.002G014100 OsFBX212 - F-box domain containing protein, expressed -
20 Sobic.002G202050 - -


Gene co-expression network
sample Sobic001G297900 Sobic001G297900 Sobic002G055000 Sobic002G055000 Sobic001G297900--Sobic002G055000 Sobic010G011500 Sobic010G011500 Sobic001G297900--Sobic010G011500 Sobic001G480900 Sobic001G480900 Sobic001G297900--Sobic001G480900 Sobic008G030801 Sobic008G030801 Sobic001G297900--Sobic008G030801 Sobic006G049633 Sobic006G049633 Sobic001G297900--Sobic006G049633 Sobic004G296750 Sobic004G296750 Sobic001G297900--Sobic004G296750 Sobic002G266700 Sobic002G266700 Sobic001G297900--Sobic002G266700 Sobic003G229900 Sobic003G229900 Sobic001G297900--Sobic003G229900 Sobic003G281000 Sobic003G281000 Sobic001G297900--Sobic003G281000 Sobic002G055000--Sobic001G480900 Sobic002G055000--Sobic010G011500 Sobic002G055000--Sobic004G296750 Sobic002G055000--Sobic006G049633 Sobic002G055000--Sobic003G281000 Sobic002G055000--Sobic001G297900 Sobic002G055000--Sobic002G266700 Sobic002G055000--Sobic003G229900 Sobic002G055000--Sobic008G030801 Sobic010G011500--Sobic002G055000 Sobic010G011500--Sobic001G480900 Sobic010G011500--Sobic004G296750 Sobic010G011500--Sobic003G281000 Sobic010G011500--Sobic006G049633 Sobic010G011500--Sobic002G266700 Sobic010G011500--Sobic001G297900 Sobic010G011500--Sobic003G229900 Sobic010G011500--Sobic008G030801 Sobic001G480900--Sobic002G055000 Sobic001G480900--Sobic004G296750 Sobic001G480900--Sobic010G011500 Sobic001G480900--Sobic003G281000 Sobic001G480900--Sobic006G049633 Sobic001G480900--Sobic002G266700 Sobic001G480900--Sobic001G297900 Sobic001G480900--Sobic003G229900 Sobic008G061900 Sobic008G061900 Sobic001G480900--Sobic008G061900 Sobic001G071500 Sobic001G071500 Sobic008G030801--Sobic001G071500 Sobic008G030801--Sobic010G011500 Sobic008G030801--Sobic001G297900 Sobic008G030801--Sobic002G055000 Sobic010G215201 Sobic010G215201 Sobic008G030801--Sobic010G215201 Sobic008G030801--Sobic001G480900 Sobic008G030801--Sobic003G229900 Sobic008G030801--Sobic006G049633 Sobic002G054800 Sobic002G054800 Sobic008G030801--Sobic002G054800 Sobic006G049633--Sobic003G229900 Sobic006G049633--Sobic002G055000 Sobic006G049633--Sobic004G296750 Sobic006G049633--Sobic001G480900 Sobic006G049633--Sobic002G266700 Sobic006G049633--Sobic010G011500 Sobic006G049633--Sobic008G061900 Sobic006G049633--Sobic003G281000 Sobic007G007100 Sobic007G007100 Sobic006G049633--Sobic007G007100 Sobic004G296750--Sobic001G480900 Sobic004G296750--Sobic002G055000 Sobic004G296750--Sobic003G281000 Sobic004G296750--Sobic006G049633 Sobic004G296750--Sobic010G011500 Sobic004G296750--Sobic002G266700 Sobic002G202050 Sobic002G202050 Sobic004G296750--Sobic002G202050 Sobic002G266700--Sobic001G480900 Sobic002G266700--Sobic002G055000 Sobic002G266700--Sobic004G296750 Sobic002G266700--Sobic006G049633 Sobic002G266700--Sobic010G011500 Sobic002G266700--Sobic003G281000 Sobic002G266700--Sobic003G229900 Sobic002G266700--Sobic001G297900 Sobic002G266700--Sobic008G061900 Sobic003G229900--Sobic006G049633 Sobic003G229900--Sobic002G055000 Sobic003G229900--Sobic010G011500 Sobic003G229900--Sobic001G480900 Sobic003G229900--Sobic002G266700 Sobic003G229900--Sobic004G296750 Sobic003G229900--Sobic008G061900 Sobic003G229900--Sobic007G007100 Sobic009G019400 Sobic009G019400 Sobic003G229900--Sobic009G019400 Sobic003G281000--Sobic004G296750 Sobic010G143666 Sobic010G143666 Sobic003G281000--Sobic010G143666 Sobic003G281000--Sobic001G480900 Sobic002G014100 Sobic002G014100 Sobic003G281000--Sobic002G014100 Sobic003G281000--Sobic002G202050 Sobic006G247200 Sobic006G247200 Sobic003G281000--Sobic006G247200
Octagon: transcription factors


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