Gene annotation
Transcriptome id Sobic.001G313800.1
Synonym Sb01g030520, NGA2
Functional annotation B3 DNA binding domain containing protein, expressed
UniProt C5WUE4
Pfam PF02362
Panther DB PTHR31140 PTHR31140:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003677; DNA binding


Orthologs (automatic annotation)
TAIR AT3G61970 : AP2/B3-like transcriptional factor family protein
RAP-DB (Rice) LOC_Os10g39190.1 : B3 DNA binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a052255 , Zm00025a044450 , Zm00025a000289 , Zm00025a000288 , Zm00025a000286 , Zm00025a036522 , Zm00025a003162 , Zm00025a027935 , Zm00025a038878 , Zm00025a000291
Brachypodium KQK05045 , KQK02620 , KQK23932 , KQJ97599 , KQK09293
Barley HORVU4Hr1G084950.1 , HORVU4Hr1G084950.2 , HORVU4Hr1G084950.3 , HORVU4Hr1G082030.1 , HORVU4Hr1G082030.3 , HORVU4Hr1G082030.2 , HORVU4Hr1G082030.5 , HORVU3Hr1G064640.1 , HORVU3Hr1G064640.3 , HORVU3Hr1G064640.2 , HORVU3Hr1G064640.5 , HORVU3Hr1G064640.4 , HORVU3Hr1G064640.7 , HORVU3Hr1G064640.6 , HORVU3Hr1G064640.8 , HORVU3Hr1G064590.1 , HORVU3Hr1G010060.2 , HORVU3Hr1G010060.1 , HORVU4Hr1G082030.4 , HORVU1Hr1G051780.2 , HORVU3Hr1G010100.1 , HORVU3Hr1G010100.2
Wheat TraesCS1A02G200500 , TraesCS3D02G260100 , TraesCS4D02G348900 , TraesCS4D02G348900 , TraesCS5A02G524700 , TraesCS5A02G524700 , TraesCS1B02G215000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G346700 GDSL-like lipase/acylhydrolase, putative, expressed -
2 Sobic.004G254300 fasciclin-like arabinogalactan precursor protein, putative, expressed -
3 Sobic.004G056500 - -
4 Sobic.002G023500 expressed protein -
5 Sobic.002G268300 3-ketoacyl-CoA synthase precursor, putative, expressed -
6 Sobic.010G130900 glycine rich protein family protein, putative, expressed -
7 Sobic.004G316000 DEFL74 - Defensin and Defensin-like DEFL family, expressed -
8 Sobic.010G144600 - -
9 Sobic.002G102800 PME/invertase inhibitor, putative, expressed -
10 Sobic.006G006400 expressed protein -
11 Sobic.007G014300 DEF6 - Defensin and Defensin-like DEFL family, expressed -
12 Sobic.010G220800 zinc-binding protein, putative, expressed -
13 Sobic.009G059932 - -
14 Sobic.003G175700 - -
15 Sobic.009G059866 - -
16 Sobic.002G066350 - -
17 Sobic.006G239600 - -
18 Sobic.001G123650 - -
19 Sobic.001G123650 - -
20 Sobic.001G123650 - -


Gene co-expression network
sample Sobic001G313800 Sobic001G313800 Sobic002G346700 Sobic002G346700 Sobic001G313800--Sobic002G346700 Sobic004G254300 Sobic004G254300 Sobic001G313800--Sobic004G254300 Sobic004G056500 Sobic004G056500 Sobic001G313800--Sobic004G056500 Sobic002G023500 Sobic002G023500 Sobic001G313800--Sobic002G023500 Sobic002G268300 Sobic002G268300 Sobic001G313800--Sobic002G268300 Sobic010G130900 Sobic010G130900 Sobic001G313800--Sobic010G130900 Sobic004G316000 Sobic004G316000 Sobic001G313800--Sobic004G316000 Sobic010G144600 Sobic010G144600 Sobic001G313800--Sobic010G144600 Sobic002G102800 Sobic002G102800 Sobic001G313800--Sobic002G102800 Sobic002G346700--Sobic004G316000 Sobic002G258500 Sobic002G258500 Sobic002G346700--Sobic002G258500 Sobic002G346700--Sobic002G023500 Sobic002G346700--Sobic010G130900 Sobic002G066350 Sobic002G066350 Sobic002G346700--Sobic002G066350 Sobic007G014300 Sobic007G014300 Sobic002G346700--Sobic007G014300 Sobic001G123650 Sobic001G123650 Sobic002G346700--Sobic001G123650 Sobic009G059866 Sobic009G059866 Sobic004G254300--Sobic009G059866 Sobic009G059932 Sobic009G059932 Sobic004G254300--Sobic009G059932 Sobic007G218400 Sobic007G218400 Sobic004G254300--Sobic007G218400 Sobic004G254300--Sobic004G056500 Sobic004G254300--Sobic002G102800 Sobic009G059800 Sobic009G059800 Sobic004G254300--Sobic009G059800 Sobic010G237400 Sobic010G237400 Sobic004G254300--Sobic010G237400 Sobic003G369800 Sobic003G369800 Sobic004G254300--Sobic003G369800 Sobic004G254300--Sobic010G144600 Sobic004G056500--Sobic002G102800 Sobic004G056500--Sobic009G059932 Sobic004G056500--Sobic009G059866 Sobic004G056500--Sobic010G144600 Sobic004G056500--Sobic009G059800 Sobic004G056500--Sobic002G023500 Sobic004G056500--Sobic007G218400 Sobic003G175700 Sobic003G175700 Sobic004G056500--Sobic003G175700 Sobic004G056500--Sobic010G237400 Sobic002G023500--Sobic010G130900 Sobic002G023500--Sobic007G014300 Sobic002G023500--Sobic003G175700 Sobic002G023500--Sobic004G316000 Sobic006G239600 Sobic006G239600 Sobic002G023500--Sobic006G239600 Sobic002G023500--Sobic001G123650 Sobic004G000800 Sobic004G000800 Sobic002G268300--Sobic004G000800 Sobic002G268300--Sobic001G313800 Sobic003G238800 Sobic003G238800 Sobic002G268300--Sobic003G238800 Sobic010G220800 Sobic010G220800 Sobic002G268300--Sobic010G220800 Sobic002G268300--Sobic004G254300 Sobic002G426000 Sobic002G426000 Sobic002G268300--Sobic002G426000 Sobic002G344201 Sobic002G344201 Sobic002G268300--Sobic002G344201 Sobic002G268300--Sobic004G056500 Sobic003G231000 Sobic003G231000 Sobic002G268300--Sobic003G231000 Sobic010G130900--Sobic002G023500 Sobic010G130900--Sobic007G014300 Sobic010G130900--Sobic006G239600 Sobic010G130900--Sobic001G123650 Sobic004G316000--Sobic007G014300 Sobic004G316000--Sobic001G123650 Sobic010G144600--Sobic003G175700 Sobic010G144600--Sobic007G014300 Sobic010G144600--Sobic002G102800 Sobic010G144600--Sobic004G056500 Sobic010G144600--Sobic006G239600 Sobic010G144600--Sobic001G123650 Sobic002G102800--Sobic004G056500 Sobic002G102800--Sobic009G059932 Sobic002G102800--Sobic009G059866 Sobic002G102800--Sobic010G144600 Sobic002G102800--Sobic009G059800 Sobic002G102800--Sobic007G218400 Sobic002G102800--Sobic010G237400 Sobic002G102800--Sobic003G175700 Sobic002G102800--Sobic007G014300
Octagon: transcription factors


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