Gene annotation
Transcriptome id Sobic.002G268300.2
Synonym KCS4, Sb02g030230
Functional annotation 3-ketoacyl-CoA synthase precursor, putative, expressed
UniProt A0A1W0W616
Pfam PF08541 PF08392
Panther DB PTHR31561 PTHR31561:SF28
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups GO:0008610lipid biosynthetic process GO:0016020membrane GO:0006633fatty acid biosynthetic process


Orthologs (automatic annotation)
TAIR AT1G19440 : 3-ketoacyl-CoA synthase 4
RAP-DB (Rice) LOC_Os09g34930.1 : 3-ketoacyl-CoA synthase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a047698
Brachypodium -
Barley HORVU5Hr1G080130.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G000800 ZOS7-01 - C2H2 zinc finger protein, expressed -
2 Sobic.001G313800 B3 DNA binding domain containing protein, expressed -
3 Sobic.003G238800 GDSL-like lipase/acylhydrolase, putative, expressed -
4 Sobic.010G220800 zinc-binding protein, putative, expressed -
5 Sobic.004G254300 fasciclin-like arabinogalactan precursor protein, putative, expressed -
6 Sobic.002G426000 - -
7 Sobic.002G344201 - -
8 Sobic.004G056500 - -
9 Sobic.003G231000 SbDFR2 expression was not detectable in the seedlings of either sorghum cultivar under our experimental conditions.(PubMedID : 20529887)@dihydroflavonol-4-reductase, putative, expressed K13082: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase
10 Sobic.009G059932 - -
11 Sobic.002G102800 PME/invertase inhibitor, putative, expressed -
12 Sobic.002G023500 expressed protein -
13 Sobic.009G059800 lysine-rich arabinogalactan protein 19 precursor, putative, expressed -
14 Sobic.002G066350 - -
15 Sobic.009G059866 - -
16 Sobic.007G218400 - -
17 Sobic.010G144600 - -
18 Sobic.010G130900 glycine rich protein family protein, putative, expressed -
19 Sobic.010G237400 ZmEBE-1 protein, putative, expressed -
20 Sobic.002G346700 GDSL-like lipase/acylhydrolase, putative, expressed -


Gene co-expression network
sample Sobic002G268300 Sobic002G268300 Sobic004G000800 Sobic004G000800 Sobic002G268300--Sobic004G000800 Sobic001G313800 Sobic001G313800 Sobic002G268300--Sobic001G313800 Sobic003G238800 Sobic003G238800 Sobic002G268300--Sobic003G238800 Sobic010G220800 Sobic010G220800 Sobic002G268300--Sobic010G220800 Sobic004G254300 Sobic004G254300 Sobic002G268300--Sobic004G254300 Sobic002G426000 Sobic002G426000 Sobic002G268300--Sobic002G426000 Sobic002G344201 Sobic002G344201 Sobic002G268300--Sobic002G344201 Sobic004G056500 Sobic004G056500 Sobic002G268300--Sobic004G056500 Sobic003G231000 Sobic003G231000 Sobic002G268300--Sobic003G231000 Sobic004G000800--Sobic002G268300 Sobic004G000800--Sobic001G313800 Sobic001G123650 Sobic001G123650 Sobic004G000800--Sobic001G123650 Sobic002G346700 Sobic002G346700 Sobic001G313800--Sobic002G346700 Sobic001G313800--Sobic004G254300 Sobic001G313800--Sobic004G056500 Sobic002G023500 Sobic002G023500 Sobic001G313800--Sobic002G023500 Sobic001G313800--Sobic002G268300 Sobic010G130900 Sobic010G130900 Sobic001G313800--Sobic010G130900 Sobic004G316000 Sobic004G316000 Sobic001G313800--Sobic004G316000 Sobic010G144600 Sobic010G144600 Sobic001G313800--Sobic010G144600 Sobic002G102800 Sobic002G102800 Sobic001G313800--Sobic002G102800 Sobic003G238800--Sobic002G268300 Sobic003G238800--Sobic002G344201 Sobic003G238800--Sobic003G231000 Sobic004G350500 Sobic004G350500 Sobic003G238800--Sobic004G350500 Sobic003G238800--Sobic004G254300 Sobic003G238800--Sobic001G313800 Sobic010G169200 Sobic010G169200 Sobic003G238800--Sobic010G169200 Sobic001G456000 Sobic001G456000 Sobic003G238800--Sobic001G456000 Sobic003G238800--Sobic010G220800 Sobic010G220800--Sobic001G313800 Sobic010G220800--Sobic004G254300 Sobic007G218400 Sobic007G218400 Sobic010G220800--Sobic007G218400 Sobic010G220800--Sobic002G268300 Sobic010G220800--Sobic010G169200 Sobic009G059800 Sobic009G059800 Sobic010G220800--Sobic009G059800 Sobic009G059932 Sobic009G059932 Sobic010G220800--Sobic009G059932 Sobic009G059866 Sobic009G059866 Sobic010G220800--Sobic009G059866 Sobic010G220800--Sobic002G102800 Sobic004G254300--Sobic009G059866 Sobic004G254300--Sobic009G059932 Sobic004G254300--Sobic007G218400 Sobic004G254300--Sobic004G056500 Sobic004G254300--Sobic002G102800 Sobic004G254300--Sobic009G059800 Sobic010G237400 Sobic010G237400 Sobic004G254300--Sobic010G237400 Sobic003G369800 Sobic003G369800 Sobic004G254300--Sobic003G369800 Sobic004G254300--Sobic010G144600 Sobic002G426000--Sobic002G268300 Sobic002G426000--Sobic004G000800 Sobic010G070900 Sobic010G070900 Sobic002G426000--Sobic010G070900 Sobic002G426000--Sobic010G220800 Sobic010G168700 Sobic010G168700 Sobic002G426000--Sobic010G168700 Sobic007G121200 Sobic007G121200 Sobic002G426000--Sobic007G121200 Sobic003G046400 Sobic003G046400 Sobic002G426000--Sobic003G046400 Sobic004G237000 Sobic004G237000 Sobic002G426000--Sobic004G237000 Sobic007G033700 Sobic007G033700 Sobic002G426000--Sobic007G033700 Sobic002G344201--Sobic009G059800 Sobic004G277700 Sobic004G277700 Sobic002G344201--Sobic004G277700 Sobic002G344201--Sobic004G254300 Sobic002G344201--Sobic009G059932 Sobic002G344201--Sobic007G218400 Sobic002G344201--Sobic010G237400 Sobic002G344201--Sobic001G456000 Sobic002G344201--Sobic009G059866 Sobic002G344201--Sobic004G056500 Sobic004G056500--Sobic002G102800 Sobic004G056500--Sobic009G059932 Sobic004G056500--Sobic009G059866 Sobic004G056500--Sobic010G144600 Sobic004G056500--Sobic009G059800 Sobic004G056500--Sobic002G023500 Sobic004G056500--Sobic007G218400 Sobic003G175700 Sobic003G175700 Sobic004G056500--Sobic003G175700 Sobic004G056500--Sobic010G237400 Sobic002G066350 Sobic002G066350 Sobic003G231000--Sobic002G066350 Sobic007G036200 Sobic007G036200 Sobic003G231000--Sobic007G036200 Sobic003G231000--Sobic002G023500 Sobic003G231000--Sobic002G346700 Sobic003G231000--Sobic004G254300 Sobic003G231000--Sobic004G056500 Sobic003G231000--Sobic010G130900 Sobic009G019550 Sobic009G019550 Sobic003G231000--Sobic009G019550 Sobic002G258500 Sobic002G258500 Sobic003G231000--Sobic002G258500
Octagon: transcription factors


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