Gene annotation
Transcriptome id Sobic.003G231000.1
Synonym Dihydroflavonol 4-reductase, Sb03g028890, M318, DFR, SbDFR2 (A1-b), TT3
Functional annotation SbDFR2 expression was not detectable in the seedlings of either sorghum cultivar under our experimental conditions. (PubMedID : 20529887)
dihydroflavonol-4-reductase, putative, expressed
UniProt Q5XMA4 , Q5XMB6 , Q5XMB5 , Q5XMA9 , Q7DM76 , C5XEH3 , P93777 , Q5XMB2 , Q5XMA7
Pfam PF01370
Panther DB PTHR10366 PTHR10366:SF276
NCBI CDD KOG1502; Flavonol reductase/cinnamoyl-CoA reductase
KEGG Orthology K13082; bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase
Gene Ontology GO:0003824; catalytic activity


Orthologs (automatic annotation)
TAIR AT5G42800 : dihydroflavonol 4-reductase
RAP-DB (Rice) LOC_Os01g44260.1 : dihydroflavonol-4-reductase, putative, expressed
MaizeGDB (Corn) Zm00025a038640 , Zm00025a028310
Brachypodium PNT72447 , KQK08883
Barley HORVU3Hr1G056560.4 , HORVU3Hr1G056560.2
Wheat TraesCS3B02G257900 , TraesCS3B02G257900 , TraesCS3A02G226600 , TraesCS3D02G224600
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G066350 - -
2 Sobic.007G036200 expressed protein -
3 Sobic.002G023500 expressed protein -
4 Sobic.002G346700 GDSL-like lipase/acylhydrolase, putative, expressed -
5 Sobic.004G254300 fasciclin-like arabinogalactan precursor protein, putative, expressed -
6 Sobic.004G056500 - -
7 Sobic.010G130900 glycine rich protein family protein, putative, expressed -
8 Sobic.009G019550 - -
9 Sobic.002G258500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
10 Sobic.004G316000 DEFL74 - Defensin and Defensin-like DEFL family, expressed -
11 Sobic.002G102800 PME/invertase inhibitor, putative, expressed -
12 Sobic.010G144600 - -
13 Sobic.009G059932 - -
14 Sobic.010G237400 ZmEBE-1 protein, putative, expressed -
15 Sobic.007G014300 DEF6 - Defensin and Defensin-like DEFL family, expressed -
16 Sobic.003G175700 - -
17 Sobic.009G059866 - -
18 Sobic.009G059800 lysine-rich arabinogalactan protein 19 precursor, putative, expressed -
19 Sobic.003G369800 - -
20 Sobic.007G218400 - -


Gene co-expression network
sample Sobic003G231000 Sobic003G231000 Sobic002G066350 Sobic002G066350 Sobic003G231000--Sobic002G066350 Sobic007G036200 Sobic007G036200 Sobic003G231000--Sobic007G036200 Sobic002G023500 Sobic002G023500 Sobic003G231000--Sobic002G023500 Sobic002G346700 Sobic002G346700 Sobic003G231000--Sobic002G346700 Sobic004G254300 Sobic004G254300 Sobic003G231000--Sobic004G254300 Sobic004G056500 Sobic004G056500 Sobic003G231000--Sobic004G056500 Sobic010G130900 Sobic010G130900 Sobic003G231000--Sobic010G130900 Sobic009G019550 Sobic009G019550 Sobic003G231000--Sobic009G019550 Sobic002G258500 Sobic002G258500 Sobic003G231000--Sobic002G258500 Sobic002G066350--Sobic010G130900 Sobic002G066350--Sobic002G023500 Sobic002G066350--Sobic007G036200 Sobic002G066350--Sobic003G231000 Sobic007G014300 Sobic007G014300 Sobic002G066350--Sobic007G014300 Sobic004G316000 Sobic004G316000 Sobic002G066350--Sobic004G316000 Sobic001G123650 Sobic001G123650 Sobic002G066350--Sobic001G123650 Sobic007G036200--Sobic002G066350 Sobic007G036200--Sobic003G231000 Sobic007G036200--Sobic002G023500 Sobic007G036200--Sobic010G130900 Sobic006G006400 Sobic006G006400 Sobic007G036200--Sobic006G006400 Sobic007G036200--Sobic002G346700 Sobic007G036200--Sobic007G014300 Sobic007G036200--Sobic004G316000 Sobic006G239600 Sobic006G239600 Sobic007G036200--Sobic006G239600 Sobic002G023500--Sobic010G130900 Sobic002G023500--Sobic007G014300 Sobic003G175700 Sobic003G175700 Sobic002G023500--Sobic003G175700 Sobic002G023500--Sobic004G316000 Sobic002G023500--Sobic006G239600 Sobic002G023500--Sobic001G123650 Sobic002G346700--Sobic004G316000 Sobic002G346700--Sobic002G258500 Sobic002G346700--Sobic002G023500 Sobic002G346700--Sobic010G130900 Sobic002G346700--Sobic002G066350 Sobic002G346700--Sobic007G014300 Sobic002G346700--Sobic001G123650 Sobic009G059866 Sobic009G059866 Sobic004G254300--Sobic009G059866 Sobic009G059932 Sobic009G059932 Sobic004G254300--Sobic009G059932 Sobic007G218400 Sobic007G218400 Sobic004G254300--Sobic007G218400 Sobic004G254300--Sobic004G056500 Sobic002G102800 Sobic002G102800 Sobic004G254300--Sobic002G102800 Sobic009G059800 Sobic009G059800 Sobic004G254300--Sobic009G059800 Sobic010G237400 Sobic010G237400 Sobic004G254300--Sobic010G237400 Sobic003G369800 Sobic003G369800 Sobic004G254300--Sobic003G369800 Sobic010G144600 Sobic010G144600 Sobic004G254300--Sobic010G144600 Sobic004G056500--Sobic002G102800 Sobic004G056500--Sobic009G059932 Sobic004G056500--Sobic009G059866 Sobic004G056500--Sobic010G144600 Sobic004G056500--Sobic009G059800 Sobic004G056500--Sobic002G023500 Sobic004G056500--Sobic007G218400 Sobic004G056500--Sobic003G175700 Sobic004G056500--Sobic010G237400 Sobic010G130900--Sobic002G023500 Sobic010G130900--Sobic007G014300 Sobic010G130900--Sobic006G239600 Sobic010G130900--Sobic001G123650 Sobic009G019550--Sobic010G237400 Sobic009G019550--Sobic003G369800 Sobic009G019550--Sobic002G346700 Sobic009G019550--Sobic004G316000 Sobic009G019550--Sobic004G056500 Sobic009G019550--Sobic002G102800 Sobic009G019550--Sobic010G144600 Sobic009G019550--Sobic009G059800 Sobic009G019550--Sobic002G258500 Sobic002G258500--Sobic004G316000 Sobic002G258500--Sobic002G023500 Sobic002G258500--Sobic010G130900 Sobic002G258500--Sobic002G346700 Sobic002G258500--Sobic007G014300 Sobic002G258500--Sobic001G123650
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.