Gene annotation
Transcriptome id Sobic.003G238800.1
Synonym Sb03g029600
Functional annotation GDSL-like lipase/acylhydrolase, putative, expressed
UniProt C5XF74
Pfam PF00657
Panther DB PTHR22835 PTHR22835:SF256
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016788; hydrolase activity, acting on ester bonds


Orthologs (automatic annotation)
TAIR AT1G31550 : GDSL-like Lipase/Acylhydrolase superfamily protein
RAP-DB (Rice) LOC_Os01g46210.1 : GDSL-like lipase/acylhydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a028241 , Zm00025a028242
Brachypodium PNT72501
Barley HORVU7Hr1G111940.1 , HORVU7Hr1G111890.2 , HORVU7Hr1G111890.1 , HORVU7Hr1G111870.1 , HORVU7Hr1G111870.2
Wheat TraesCS7A02G500500 , TraesCS7A02G500000 , TraesCS7D02G487000 , TraesCS7B02G407600 , TraesCS7A02G500600 , TraesCS7D02G487300 , TraesCS6A02G137500 , TraesCS7D02G487200 , TraesCS6B02G165900 , TraesCS6D02G126600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G268300 3-ketoacyl-CoA synthase precursor, putative, expressed -
2 Sobic.002G344201 - -
3 Sobic.003G231000 SbDFR2 expression was not detectable in the seedlings of either sorghum cultivar under our experimental conditions.(PubMedID : 20529887)@dihydroflavonol-4-reductase, putative, expressed K13082: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase
4 Sobic.004G350500 pectinesterase, putative, expressed K01051: pectinesterase
5 Sobic.004G254300 fasciclin-like arabinogalactan precursor protein, putative, expressed -
6 Sobic.001G313800 B3 DNA binding domain containing protein, expressed -
7 Sobic.010G169200 homeobox domain containing protein, expressed -
8 Sobic.001G456000 YABBY domain containing protein, putative, expressed -
9 Sobic.010G220800 zinc-binding protein, putative, expressed -
10 Sobic.003G046400 transcriptional corepressor LEUNIG, putative, expressed -
11 Sobic.004G277700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
12 Sobic.002G066350 - -
13 Sobic.007G036200 expressed protein -
14 Sobic.004G056500 - -
15 Sobic.007G218400 - -
16 Sobic.009G059800 lysine-rich arabinogalactan protein 19 precursor, putative, expressed -
17 Sobic.001G106500 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
18 Sobic.002G426000 - -
19 Sobic.009G059932 - -
20 Sobic.007G121200 YDG/SRA domain containing protein, expressed -


Gene co-expression network
sample Sobic003G238800 Sobic003G238800 Sobic002G268300 Sobic002G268300 Sobic003G238800--Sobic002G268300 Sobic002G344201 Sobic002G344201 Sobic003G238800--Sobic002G344201 Sobic003G231000 Sobic003G231000 Sobic003G238800--Sobic003G231000 Sobic004G350500 Sobic004G350500 Sobic003G238800--Sobic004G350500 Sobic004G254300 Sobic004G254300 Sobic003G238800--Sobic004G254300 Sobic001G313800 Sobic001G313800 Sobic003G238800--Sobic001G313800 Sobic010G169200 Sobic010G169200 Sobic003G238800--Sobic010G169200 Sobic001G456000 Sobic001G456000 Sobic003G238800--Sobic001G456000 Sobic010G220800 Sobic010G220800 Sobic003G238800--Sobic010G220800 Sobic004G000800 Sobic004G000800 Sobic002G268300--Sobic004G000800 Sobic002G268300--Sobic001G313800 Sobic002G268300--Sobic003G238800 Sobic002G268300--Sobic010G220800 Sobic002G268300--Sobic004G254300 Sobic002G426000 Sobic002G426000 Sobic002G268300--Sobic002G426000 Sobic002G268300--Sobic002G344201 Sobic004G056500 Sobic004G056500 Sobic002G268300--Sobic004G056500 Sobic002G268300--Sobic003G231000 Sobic009G059800 Sobic009G059800 Sobic002G344201--Sobic009G059800 Sobic004G277700 Sobic004G277700 Sobic002G344201--Sobic004G277700 Sobic002G344201--Sobic004G254300 Sobic009G059932 Sobic009G059932 Sobic002G344201--Sobic009G059932 Sobic007G218400 Sobic007G218400 Sobic002G344201--Sobic007G218400 Sobic010G237400 Sobic010G237400 Sobic002G344201--Sobic010G237400 Sobic002G344201--Sobic001G456000 Sobic009G059866 Sobic009G059866 Sobic002G344201--Sobic009G059866 Sobic002G344201--Sobic004G056500 Sobic002G066350 Sobic002G066350 Sobic003G231000--Sobic002G066350 Sobic007G036200 Sobic007G036200 Sobic003G231000--Sobic007G036200 Sobic002G023500 Sobic002G023500 Sobic003G231000--Sobic002G023500 Sobic002G346700 Sobic002G346700 Sobic003G231000--Sobic002G346700 Sobic003G231000--Sobic004G254300 Sobic003G231000--Sobic004G056500 Sobic010G130900 Sobic010G130900 Sobic003G231000--Sobic010G130900 Sobic009G019550 Sobic009G019550 Sobic003G231000--Sobic009G019550 Sobic002G258500 Sobic002G258500 Sobic003G231000--Sobic002G258500 Sobic004G350500--Sobic003G231000 Sobic004G350500--Sobic007G036200 Sobic004G350500--Sobic002G066350 Sobic004G350500--Sobic003G238800 Sobic005G131000 Sobic005G131000 Sobic004G350500--Sobic005G131000 Sobic004G350500--Sobic004G254300 Sobic004G350500--Sobic002G023500 Sobic004G350500--Sobic002G268300 Sobic009G111301 Sobic009G111301 Sobic004G350500--Sobic009G111301 Sobic004G254300--Sobic009G059866 Sobic004G254300--Sobic009G059932 Sobic004G254300--Sobic007G218400 Sobic004G254300--Sobic004G056500 Sobic002G102800 Sobic002G102800 Sobic004G254300--Sobic002G102800 Sobic004G254300--Sobic009G059800 Sobic004G254300--Sobic010G237400 Sobic003G369800 Sobic003G369800 Sobic004G254300--Sobic003G369800 Sobic010G144600 Sobic010G144600 Sobic004G254300--Sobic010G144600 Sobic001G313800--Sobic002G346700 Sobic001G313800--Sobic004G254300 Sobic001G313800--Sobic004G056500 Sobic001G313800--Sobic002G023500 Sobic001G313800--Sobic002G268300 Sobic001G313800--Sobic010G130900 Sobic004G316000 Sobic004G316000 Sobic001G313800--Sobic004G316000 Sobic001G313800--Sobic010G144600 Sobic001G313800--Sobic002G102800 Sobic010G169200--Sobic007G218400 Sobic010G169200--Sobic010G220800 Sobic010G169200--Sobic009G059800 Sobic010G169200--Sobic004G254300 Sobic010G169200--Sobic009G059932 Sobic010G169200--Sobic010G237400 Sobic010G169200--Sobic009G059866 Sobic010G169200--Sobic002G102800 Sobic010G169200--Sobic004G056500 Sobic002G078900 Sobic002G078900 Sobic001G456000--Sobic002G078900 Sobic010G183800 Sobic010G183800 Sobic001G456000--Sobic010G183800 Sobic001G459300 Sobic001G459300 Sobic001G456000--Sobic001G459300 Sobic010G048600 Sobic010G048600 Sobic001G456000--Sobic010G048600 Sobic001G459400 Sobic001G459400 Sobic001G456000--Sobic001G459400 Sobic001G106500 Sobic001G106500 Sobic001G456000--Sobic001G106500 Sobic005G070700 Sobic005G070700 Sobic001G456000--Sobic005G070700 Sobic003G243100 Sobic003G243100 Sobic001G456000--Sobic003G243100 Sobic001G456000--Sobic004G277700 Sobic010G220800--Sobic001G313800 Sobic010G220800--Sobic004G254300 Sobic010G220800--Sobic007G218400 Sobic010G220800--Sobic002G268300 Sobic010G220800--Sobic010G169200 Sobic010G220800--Sobic009G059800 Sobic010G220800--Sobic009G059932 Sobic010G220800--Sobic009G059866 Sobic010G220800--Sobic002G102800
Octagon: transcription factors


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