Gene annotation
Transcriptome id Sobic.004G277700.1
Synonym Sb04g031480
Functional annotation invertase/pectin methylesterase inhibitor family protein, putative, expressed
UniProt A0A1Z5RPT7
Pfam PF04043
Panther DB PTHR33068 PTHR33068:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0004857; enzyme inhibitor activity


Orthologs (automatic annotation)
TAIR AT5G46950 : Plant invertase/pectin methylesterase inhibitor superfamily protein
RAP-DB (Rice) LOC_Os02g46290.1 : invertase/pectin methylesterase inhibitor family protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G059800 lysine-rich arabinogalactan protein 19 precursor, putative, expressed -
2 Sobic.004G086500 expressed protein -
3 Sobic.002G344201 - -
4 Sobic.009G059932 - -
5 Sobic.007G218400 - -
6 Sobic.010G237400 ZmEBE-1 protein, putative, expressed -
7 Sobic.001G456000 YABBY domain containing protein, putative, expressed -
8 Sobic.004G254300 fasciclin-like arabinogalactan precursor protein, putative, expressed -
9 Sobic.004G056500 - -
10 Sobic.009G059866 - -
11 Sobic.002G102800 PME/invertase inhibitor, putative, expressed -
12 Sobic.003G369800 - -
13 Sobic.002G343600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@-(PubMedID : 23108465)@polygalacturonase inhibitor 1 precursor, putative, expressed -
14 Sobic.003G231000 SbDFR2 expression was not detectable in the seedlings of either sorghum cultivar under our experimental conditions.(PubMedID : 20529887)@dihydroflavonol-4-reductase, putative, expressed K13082: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase
15 Sobic.010G048600 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
16 Sobic.001G459300 - -
17 Sobic.010G144600 - -
18 Sobic.010G169200 homeobox domain containing protein, expressed -
19 Sobic.002G023500 expressed protein -
20 Sobic.009G019550 - -


Gene co-expression network
sample Sobic004G277700 Sobic004G277700 Sobic009G059800 Sobic009G059800 Sobic004G277700--Sobic009G059800 Sobic004G086500 Sobic004G086500 Sobic004G277700--Sobic004G086500 Sobic002G344201 Sobic002G344201 Sobic004G277700--Sobic002G344201 Sobic009G059932 Sobic009G059932 Sobic004G277700--Sobic009G059932 Sobic007G218400 Sobic007G218400 Sobic004G277700--Sobic007G218400 Sobic010G237400 Sobic010G237400 Sobic004G277700--Sobic010G237400 Sobic001G456000 Sobic001G456000 Sobic004G277700--Sobic001G456000 Sobic004G254300 Sobic004G254300 Sobic004G277700--Sobic004G254300 Sobic004G056500 Sobic004G056500 Sobic004G277700--Sobic004G056500 Sobic009G059800--Sobic009G059932 Sobic009G059800--Sobic010G237400 Sobic009G059866 Sobic009G059866 Sobic009G059800--Sobic009G059866 Sobic009G059800--Sobic007G218400 Sobic002G102800 Sobic002G102800 Sobic009G059800--Sobic002G102800 Sobic009G059800--Sobic004G056500 Sobic003G369800 Sobic003G369800 Sobic009G059800--Sobic003G369800 Sobic010G144600 Sobic010G144600 Sobic009G059800--Sobic010G144600 Sobic009G059800--Sobic004G254300 Sobic004G086500--Sobic004G277700 Sobic004G086500--Sobic009G059800 Sobic004G086500--Sobic010G237400 Sobic004G086500--Sobic003G369800 Sobic004G086500--Sobic004G056500 Sobic004G086500--Sobic009G059932 Sobic004G086500--Sobic002G102800 Sobic004G086500--Sobic004G254300 Sobic004G086500--Sobic009G059866 Sobic002G344201--Sobic009G059800 Sobic002G344201--Sobic004G277700 Sobic002G344201--Sobic004G254300 Sobic002G344201--Sobic009G059932 Sobic002G344201--Sobic007G218400 Sobic002G344201--Sobic010G237400 Sobic002G344201--Sobic001G456000 Sobic002G344201--Sobic009G059866 Sobic002G344201--Sobic004G056500 Sobic009G059932--Sobic009G059866 Sobic009G059932--Sobic002G102800 Sobic009G059932--Sobic004G056500 Sobic009G059932--Sobic009G059800 Sobic009G059932--Sobic007G218400 Sobic009G059932--Sobic010G237400 Sobic009G059932--Sobic010G144600 Sobic009G059932--Sobic003G369800 Sobic009G059932--Sobic004G254300 Sobic007G218400--Sobic009G059932 Sobic007G218400--Sobic009G059866 Sobic007G218400--Sobic009G059800 Sobic007G218400--Sobic002G102800 Sobic007G218400--Sobic004G056500 Sobic007G218400--Sobic010G237400 Sobic007G218400--Sobic010G144600 Sobic007G218400--Sobic003G369800 Sobic007G218400--Sobic004G254300 Sobic010G237400--Sobic003G369800 Sobic010G237400--Sobic009G059800 Sobic010G237400--Sobic009G059932 Sobic010G237400--Sobic002G102800 Sobic010G237400--Sobic009G059866 Sobic010G237400--Sobic007G218400 Sobic010G237400--Sobic004G056500 Sobic010G237400--Sobic010G144600 Sobic003G175300 Sobic003G175300 Sobic010G237400--Sobic003G175300 Sobic002G078900 Sobic002G078900 Sobic001G456000--Sobic002G078900 Sobic010G183800 Sobic010G183800 Sobic001G456000--Sobic010G183800 Sobic001G459300 Sobic001G459300 Sobic001G456000--Sobic001G459300 Sobic010G048600 Sobic010G048600 Sobic001G456000--Sobic010G048600 Sobic001G459400 Sobic001G459400 Sobic001G456000--Sobic001G459400 Sobic001G106500 Sobic001G106500 Sobic001G456000--Sobic001G106500 Sobic005G070700 Sobic005G070700 Sobic001G456000--Sobic005G070700 Sobic003G243100 Sobic003G243100 Sobic001G456000--Sobic003G243100 Sobic001G456000--Sobic004G277700 Sobic004G254300--Sobic009G059866 Sobic004G254300--Sobic009G059932 Sobic004G254300--Sobic007G218400 Sobic004G254300--Sobic004G056500 Sobic004G254300--Sobic002G102800 Sobic004G254300--Sobic009G059800 Sobic004G254300--Sobic010G237400 Sobic004G254300--Sobic003G369800 Sobic004G254300--Sobic010G144600 Sobic004G056500--Sobic002G102800 Sobic004G056500--Sobic009G059932 Sobic004G056500--Sobic009G059866 Sobic004G056500--Sobic010G144600 Sobic004G056500--Sobic009G059800 Sobic002G023500 Sobic002G023500 Sobic004G056500--Sobic002G023500 Sobic004G056500--Sobic007G218400 Sobic003G175700 Sobic003G175700 Sobic004G056500--Sobic003G175700 Sobic004G056500--Sobic010G237400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.